| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673249
Identifier: 21673249
GI number: 21673249
Start: 423095
End: 424306
Strand: Direct
Name: 21673249
Synonym: CT0410
Alternate gene names: NA
Gene position: 423095-424306 (Clockwise)
Preceding gene: 21673248
Following gene: 21673250
Centisome position: 19.63
GC content: 59.74
Gene sequence:
>1212_bases GTGATGGCTCGATTCTACATAAGCATCAGACGTTTTGGCGCACTGCCGGTTCTTGGCGTCATTTTGTTGCAGGCGGCATT GCTCGCGGGATGCGGTACGCCTTCTGGCGGAAAACAGCATTCGACGAGCGTGGCGTCCGCTCCGGATTCTCTCAAGAGCT CTATCGGGTATTCGCGGCGCTTCAGGCTTTTTCGCCGGGGTGAGGTTACGGTGCTGGAGGTCATGGCCGGTCAAAAAGCT TACCCTGATACGCTTCGGTACCTTCTGGTTCCGGAGGGCAGGCCTCAACCTTCGGGTTTTGTTGGTTACACAGTCATTCG CACGCCGGTCAAGCGGATTGCCGTATTTTCCACCACGCATATCGGTTTTCTCGATATGCTCGGCAGGAGTGACGGCATTA TCGGGGTTTCCCGTCCCGAGTTTGTCAACACCCCTGCGGTCAGATCCCGCATAAGGAGCGGAGCGATCAAAGCGATCGGC ATGCCGTTCAGTCCCGATGTCGAGGCTCTGCTGAATCTGGAGCCCGATCTGGTTATCGCGCCGGCGCTTCCCGCGGCCCG GAAGACCGATTATCAGGCGCTTGTCCAGGCGGGCATTCCGGTGCTCGTCGTTGCCGAATGGCTGGAGCCGTCGCCTCTCG GGCGCGCCGAGTGGATCAAGCTTTTCGGCGCGCTTGTCGGCAAGGAGAAACTTGCCCGCGAGCGGTTTGCTGCGATTGAA TCTTCGTACCTGAAGATCGCCGCGCTTTCCCGTAACCTGCCGAACCGCCCAACCGTGCTGACCGGCCTGCCGGTGAAGGA TGCCTGGTATGTCCCGACGGGCGGAAGCTACGTGGCGGCCATGCTTCGTGATGCAGGGGCCTCGTACCACTGGCGTGATC TGCCCGGAACCGGAAGCGTGCCGCTTACGATTGAGGCGGTCTGGCCGGTTGCGCTCGAAGCTGAGTACTGGCTGAATACC GGAACGGTCTCCACTCTCGATGAGTTGCTGGCCGTCGATTCCCGTTTCGGGCAGATGCGGTCGGTCAGGGAGCGGCGAGT CTGGAACAACAACCGGCTGGTCAACGCAGCGGGCGGCAATGCTTACTGGGAGAGTGGCGTGGTCAGGCCTGACCTGATTC TAAAGGATCTGGTGATGATTCTTCATCCGGGTCTTCTTCGCGCTCACGGTATCGGTGAGGGTGAACTCACCTTTTTCCAG GAGGTGAAGTAA
Upstream 100 bases:
>100_bases CGTGCTCTGTTCGGCTTGTGAGCAGGAGTGTGCAGCGGGCGCGATCTCGTTTCCCTCGCCTGAGGAGTTCGAGCAGTTTG TTGAATATCTCGACTGAACG
Downstream 100 bases:
>100_bases CATGAGTAACGTTGCGGAACTTCGTGCCCCGGCCCATCCCTGGCCTTCGCTCGTGCCGAAAAGCGGCATGATCCTCTTTA TGCTGATCCTGCTTGTGCTG
Product: iron(III) ABC transporter, periplasmic iron-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MMARFYISIRRFGALPVLGVILLQAALLAGCGTPSGGKQHSTSVASAPDSLKSSIGYSRRFRLFRRGEVTVLEVMAGQKA YPDTLRYLLVPEGRPQPSGFVGYTVIRTPVKRIAVFSTTHIGFLDMLGRSDGIIGVSRPEFVNTPAVRSRIRSGAIKAIG MPFSPDVEALLNLEPDLVIAPALPAARKTDYQALVQAGIPVLVVAEWLEPSPLGRAEWIKLFGALVGKEKLARERFAAIE SSYLKIAALSRNLPNRPTVLTGLPVKDAWYVPTGGSYVAAMLRDAGASYHWRDLPGTGSVPLTIEAVWPVALEAEYWLNT GTVSTLDELLAVDSRFGQMRSVRERRVWNNNRLVNAAGGNAYWESGVVRPDLILKDLVMILHPGLLRAHGIGEGELTFFQ EVK
Sequences:
>Translated_403_residues MMARFYISIRRFGALPVLGVILLQAALLAGCGTPSGGKQHSTSVASAPDSLKSSIGYSRRFRLFRRGEVTVLEVMAGQKA YPDTLRYLLVPEGRPQPSGFVGYTVIRTPVKRIAVFSTTHIGFLDMLGRSDGIIGVSRPEFVNTPAVRSRIRSGAIKAIG MPFSPDVEALLNLEPDLVIAPALPAARKTDYQALVQAGIPVLVVAEWLEPSPLGRAEWIKLFGALVGKEKLARERFAAIE SSYLKIAALSRNLPNRPTVLTGLPVKDAWYVPTGGSYVAAMLRDAGASYHWRDLPGTGSVPLTIEAVWPVALEAEYWLNT GTVSTLDELLAVDSRFGQMRSVRERRVWNNNRLVNAAGGNAYWESGVVRPDLILKDLVMILHPGLLRAHGIGEGELTFFQ EVK >Mature_403_residues MMARFYISIRRFGALPVLGVILLQAALLAGCGTPSGGKQHSTSVASAPDSLKSSIGYSRRFRLFRRGEVTVLEVMAGQKA YPDTLRYLLVPEGRPQPSGFVGYTVIRTPVKRIAVFSTTHIGFLDMLGRSDGIIGVSRPEFVNTPAVRSRIRSGAIKAIG MPFSPDVEALLNLEPDLVIAPALPAARKTDYQALVQAGIPVLVVAEWLEPSPLGRAEWIKLFGALVGKEKLARERFAAIE SSYLKIAALSRNLPNRPTVLTGLPVKDAWYVPTGGSYVAAMLRDAGASYHWRDLPGTGSVPLTIEAVWPVALEAEYWLNT GTVSTLDELLAVDSRFGQMRSVRERRVWNNNRLVNAAGGNAYWESGVVRPDLILKDLVMILHPGLLRAHGIGEGELTFFQ EVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 43957; Mature: 43957
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMARFYISIRRFGALPVLGVILLQAALLAGCGTPSGGKQHSTSVASAPDSLKSSIGYSRR CCEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHCCHHHH FRLFRRGEVTVLEVMAGQKAYPDTLRYLLVPEGRPQPSGFVGYTVIRTPVKRIAVFSTTH HHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHCCH IGFLDMLGRSDGIIGVSRPEFVNTPAVRSRIRSGAIKAIGMPFSPDVEALLNLEPDLVIA HHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHCCEEEECCCCCCCHHHHHCCCCCEEEE PALPAARKTDYQALVQAGIPVLVVAEWLEPSPLGRAEWIKLFGALVGKEKLARERFAAIE CCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SSYLKIAALSRNLPNRPTVLTGLPVKDAWYVPTGGSYVAAMLRDAGASYHWRDLPGTGSV HHHHEEEEHHCCCCCCCEEEECCCCCCCEECCCCCHHHHHHHHHCCCCCEECCCCCCCCC PLTIEAVWPVALEAEYWLNTGTVSTLDELLAVDSRFGQMRSVRERRVWNNNRLVNAAGGN CEEEEEECCEEEEHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC AYWESGVVRPDLILKDLVMILHPGLLRAHGIGEGELTFFQEVK CHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCEEHEECCC >Mature Secondary Structure MMARFYISIRRFGALPVLGVILLQAALLAGCGTPSGGKQHSTSVASAPDSLKSSIGYSRR CCEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHCCHHHH FRLFRRGEVTVLEVMAGQKAYPDTLRYLLVPEGRPQPSGFVGYTVIRTPVKRIAVFSTTH HHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHCCH IGFLDMLGRSDGIIGVSRPEFVNTPAVRSRIRSGAIKAIGMPFSPDVEALLNLEPDLVIA HHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHCCEEEECCCCCCCHHHHHCCCCCEEEE PALPAARKTDYQALVQAGIPVLVVAEWLEPSPLGRAEWIKLFGALVGKEKLARERFAAIE CCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SSYLKIAALSRNLPNRPTVLTGLPVKDAWYVPTGGSYVAAMLRDAGASYHWRDLPGTGSV HHHHEEEEHHCCCCCCCEEEECCCCCCCEECCCCCHHHHHHHHHCCCCCEECCCCCCCCC PLTIEAVWPVALEAEYWLNTGTVSTLDELLAVDSRFGQMRSVRERRVWNNNRLVNAAGGN CEEEEEECCEEEEHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC AYWESGVVRPDLILKDLVMILHPGLLRAHGIGEGELTFFQEVK CHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCEEHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]