| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is gpmA
Identifier: 21673238
GI number: 21673238
Start: 412646
End: 413389
Strand: Direct
Name: gpmA
Synonym: CT0399
Alternate gene names: 21673238
Gene position: 412646-413389 (Clockwise)
Preceding gene: 21673222
Following gene: 21673240
Centisome position: 19.15
GC content: 56.59
Gene sequence:
>744_bases ATGAAGAAACTTGTCCTGCTGAGGCACGGCGAAAGCCAGTGGAACCGGGAGAACCGTTTCACCGGATGGGTGGATGTTGA TCTTTCCGAGAAAGGAAGAGAAGAGGCGAGAACCGCTGGCCAGCTGCTCAAGGATGAGGGTTTCGTGTTTGACCTCGCCT ACACTTCGGTGCTCAAGCGCGCCATCAGGACGCTCTGGACGGTGCTCGACGAGATGAATCTCATGTGGATTCCCGTCACA AAAAACTGGCGTCTCAACGAACGCCATTACGGAGCATTGCAGGGGCTCAACAAGGCAGAGACTGCCCAGCGCCACGGCGA CGAGCAGGTGCTGATCTGGCGCCGCAGCTACGACACGCCGCCACCGGCTCTCACCGAGAGCGATGAGTTCTGGCCGGGCA AGGACCCGCGCTATGCTTCGCTGTCCTCTCAGGAACTGCCTGCCACGGAGTGCCTGAAGGATACGGTTGCGCGCTTCCTT CCCTACTGGCACGAGACTATTGCACCGCAGATTCGCGATGGCAAGAATGTCATTATTACAGCTCACGGTAATTCGCTCAG GGCGCTGGTCAAATATCTCGACAACATTTCGGATGAGGATATCGTCGGTCTGAACATTCCTACCGGTATTCCGCTGGTGT ACGAGCTTGACGACGATCTCAAGCCGCTGAAGAGTTACTATCTGGGCGACCAGGAGGAGCTGAAGAAAAAGGTGGAGGTC GTCGTCAAACAGGGCAAAGCCTGA
Upstream 100 bases:
>100_bases ATGTTTGAGAATGGTTTTTCAGAATATTAAATTGCCAAGCCTGTAAATGGCGCACTCTTTCCTTTTTCAAGAATCAATTT ACGAGCACAAGGAGCGTTAC
Downstream 100 bases:
>100_bases ACTTTCAAGGACTTCCGGTTTCGCGACATTCTGTTTGGCCTGAAGCTTTTGGCTTGAAGGTAAAAGGTCATGAATTTTCT GTTCAATACCTTATATTCTG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKKLVLLRHGESQWNRENRFTGWVDVDLSEKGREEARTAGQLLKDEGFVFDLAYTSVLKRAIRTLWTVLDEMNLMWIPVT KNWRLNERHYGALQGLNKAETAQRHGDEQVLIWRRSYDTPPPALTESDEFWPGKDPRYASLSSQELPATECLKDTVARFL PYWHETIAPQIRDGKNVIITAHGNSLRALVKYLDNISDEDIVGLNIPTGIPLVYELDDDLKPLKSYYLGDQEELKKKVEV VVKQGKA
Sequences:
>Translated_247_residues MKKLVLLRHGESQWNRENRFTGWVDVDLSEKGREEARTAGQLLKDEGFVFDLAYTSVLKRAIRTLWTVLDEMNLMWIPVT KNWRLNERHYGALQGLNKAETAQRHGDEQVLIWRRSYDTPPPALTESDEFWPGKDPRYASLSSQELPATECLKDTVARFL PYWHETIAPQIRDGKNVIITAHGNSLRALVKYLDNISDEDIVGLNIPTGIPLVYELDDDLKPLKSYYLGDQEELKKKVEV VVKQGKA >Mature_247_residues MKKLVLLRHGESQWNRENRFTGWVDVDLSEKGREEARTAGQLLKDEGFVFDLAYTSVLKRAIRTLWTVLDEMNLMWIPVT KNWRLNERHYGALQGLNKAETAQRHGDEQVLIWRRSYDTPPPALTESDEFWPGKDPRYASLSSQELPATECLKDTVARFL PYWHETIAPQIRDGKNVIITAHGNSLRALVKYLDNISDEDIVGLNIPTGIPLVYELDDDLKPLKSYYLGDQEELKKKVEV VVKQGKA
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
Homologues:
Organism=Homo sapiens, GI50593010, Length=248, Percent_Identity=58.8709677419355, Blast_Score=313, Evalue=9e-86, Organism=Homo sapiens, GI4505753, Length=248, Percent_Identity=60.8870967741936, Blast_Score=312, Evalue=2e-85, Organism=Homo sapiens, GI71274132, Length=248, Percent_Identity=58.4677419354839, Blast_Score=297, Evalue=7e-81, Organism=Homo sapiens, GI4502445, Length=250, Percent_Identity=50, Blast_Score=264, Evalue=4e-71, Organism=Homo sapiens, GI40353764, Length=250, Percent_Identity=50, Blast_Score=264, Evalue=4e-71, Organism=Homo sapiens, GI310129614, Length=161, Percent_Identity=62.7329192546584, Blast_Score=206, Evalue=1e-53, Organism=Escherichia coli, GI1786970, Length=247, Percent_Identity=66.8016194331984, Blast_Score=349, Evalue=8e-98, Organism=Saccharomyces cerevisiae, GI6322697, Length=246, Percent_Identity=52.8455284552846, Blast_Score=258, Evalue=7e-70, Organism=Saccharomyces cerevisiae, GI6324516, Length=293, Percent_Identity=33.7883959044369, Blast_Score=150, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6320183, Length=297, Percent_Identity=34.006734006734, Blast_Score=149, Evalue=3e-37, Organism=Drosophila melanogaster, GI24646216, Length=249, Percent_Identity=56.2248995983936, Blast_Score=287, Evalue=5e-78, Organism=Drosophila melanogaster, GI85725270, Length=249, Percent_Identity=55.0200803212851, Blast_Score=277, Evalue=4e-75, Organism=Drosophila melanogaster, GI85725272, Length=249, Percent_Identity=55.0200803212851, Blast_Score=277, Evalue=4e-75, Organism=Drosophila melanogaster, GI24650981, Length=249, Percent_Identity=55.0200803212851, Blast_Score=277, Evalue=4e-75, Organism=Drosophila melanogaster, GI28571815, Length=249, Percent_Identity=39.7590361445783, Blast_Score=181, Evalue=4e-46, Organism=Drosophila melanogaster, GI28571817, Length=249, Percent_Identity=39.7590361445783, Blast_Score=181, Evalue=4e-46, Organism=Drosophila melanogaster, GI24648979, Length=249, Percent_Identity=39.7590361445783, Blast_Score=181, Evalue=6e-46,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): GPMA_CHLTE (Q8KFC8)
Other databases:
- EMBL: AE006470 - RefSeq: NP_661303.1 - ProteinModelPortal: Q8KFC8 - SMR: Q8KFC8 - GeneID: 1008102 - GenomeReviews: AE006470_GR - KEGG: cte:CT0399 - NMPDR: fig|194439.1.peg.397 - TIGR: CT0399 - HOGENOM: HBG658938 - OMA: TGWKDPD - ProtClustDB: PRK14115 - BioCyc: CTEP194439:CT_0399-MONOMER - BRENDA: 5.4.2.1 - GO: GO:0006096 - HAMAP: MF_01039 - InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 - PANTHER: PTHR11931 - SMART: SM00855 - TIGRFAMs: TIGR01258
Pfam domain/function: PF00300 PGAM
EC number: =5.4.2.1
Molecular weight: Translated: 28435; Mature: 28435
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00175 PG_MUTASE
Important sites: ACT_SITE 9-9 ACT_SITE 182-182
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVLLRHGESQWNRENRFTGWVDVDLSEKGREEARTAGQLLKDEGFVFDLAYTSVLKR CCCEEEEECCCHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHH AIRTLWTVLDEMNLMWIPVTKNWRLNERHYGALQGLNKAETAQRHGDEQVLIWRRSYDTP HHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCC PPALTESDEFWPGKDPRYASLSSQELPATECLKDTVARFLPYWHETIAPQIRDGKNVIIT CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE AHGNSLRALVKYLDNISDEDIVGLNIPTGIPLVYELDDDLKPLKSYYLGDQEELKKKVEV ECCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHH VVKQGKA HHHCCCC >Mature Secondary Structure MKKLVLLRHGESQWNRENRFTGWVDVDLSEKGREEARTAGQLLKDEGFVFDLAYTSVLKR CCCEEEEECCCHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHH AIRTLWTVLDEMNLMWIPVTKNWRLNERHYGALQGLNKAETAQRHGDEQVLIWRRSYDTP HHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCC PPALTESDEFWPGKDPRYASLSSQELPATECLKDTVARFLPYWHETIAPQIRDGKNVIIT CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE AHGNSLRALVKYLDNISDEDIVGLNIPTGIPLVYELDDDLKPLKSYYLGDQEELKKKVEV ECCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHH VVKQGKA HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901