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The map label for this gene is arnT [H]

Identifier: 21673202

GI number: 21673202

Start: 376088

End: 377653

Strand: Reverse

Name: arnT [H]

Synonym: CT0363

Alternate gene names: 21673202

Gene position: 377653-376088 (Counterclockwise)

Preceding gene: 21673203

Following gene: 21673201

Centisome position: 17.52

GC content: 59.2

Gene sequence:

>1566_bases
ATGAAACTGCAACCATACAGACCTGACAGAAACATCCTTTTCGCCGGACTTTTCCTGATCATTTTCCTGAGCTTCTTTGC
CGGAATCGGCTCCGGGCCGCTCTTCGACGTGGACGAGGGCGCGTTCAGCGAGGCGACGCGGGAGATGCTCGTGTCGAAAA
ATTACCTCACCACCTACCTGAACGGCGCGCTGCGCTTTGACAAGCCGATCCTCGTCTACTGGCTGCAACTGCTCTCGATC
AAGACGTTCGGCATCAGCGAGTTCGCCTTCCGGCTCCCCTCGGCTGTGGCGGCGGCACTCTGGGCGGGCGCGATTTTCTT
CTTCGTGCGGCGCGAGCGCAACGAAACCGAGGCGATTCTGGCTACAGCGCTGATGGCGCTATCGTTGCAGGTGAGCATCA
TCGCCAAGGCGGCCATTGCCGACGCCGTGCTCAATCTCTGTCTGGCAATCGCGCTGACGGCGCTCTTCACGCACTGGCGA
ACAAAGCGGCGATCGTGGATCTACATCGCCTTCGCGGCGATGGGCTTCGGGATGCTCGACAAGGGGCCGGTGGCGATTCT
CATTCCGATCGCGGTATCATTCCTCTTCTTCCTCGCGCAGAAGGAGTTGACGGCGTGGTTCCGAGCCATGCTGAATCCGA
CGGCTATCGCGCTGTTTCTCCTGATCGCGCTCCCCTGGTACGTGCTCGAATACCGCGAGCAGGGGCAGGCGTTCATCGAC
GGCTTTTTCATGAAGCACAACGTCAGACGCTTCAACGGCTCAATGGAGGGTCACTCGGGTTCGCTCTTCTACTACATTCC
GGTGGTGCTCATCGGCATCATGCCCTCGACCGGGCTCTTTTTCGGCCTCTTCACGAAGCTCCGGCAGCGCCTCGCCGACC
CGCTCTGGCAGTTCTGCCTGATCTGGTTCGCTTTCGTTTTCGTCTTCTTCTCGCTGTCGGGCACCAAGCTACCGCACTAC
ATGATCTACGGCTACACGCCGCTCTTCATCCTCGTCGGCGCGGAACTGTCGAAAATCGAGCGTTCGTGGCTTCTCGCGCT
CTGGCCCACCGGTCTCTTGCTGCTCCTCGCTGCCCTGCCTTTCGCGCTGGAGATGCTCATGCCGTCGATGGAGAATCTCT
TCATCCAGGCTCAGCTTCAGGGGTTTCTAACGGAGATGGAGTCAAACCACTTCTCGCTGCTCATGCTCGCCGCGGCAGCG
CTCTGCATGCTCCTGCAATTCGTGCCGGCGCTCGCGCCGTCAATGCGATTCATCATCGGCGGAGCGCTCCTGACCTTCTC
GTTCAACTTCGTGGCGATGCCGATGGCGGCCAGAGTGATGCAGGAACCGGTCAAGGAGGCTGCGCAGCTTGCCCGGAAGG
AGCAGCTCAAAATCGTGATGTGGAAGGTCTATTACCCCTCTTTTTTTGTATATTCAGGCTCTTTTGCCGAAAGGCGCTTC
CCTGAACCGGGTGACGTGGTGCTGACCACCATCGACCGTCTCGAAAAGCTCGGACCTGTCGAGCGCCTGTATGGCAGGAA
TGGAATCATGCTCGTCAGAATGCCGACTCAACCGACTTCCCGATGA

Upstream 100 bases:

>100_bases
GTGATCTGCCAGCACTACCTGAGCGACATCGTGGCCGGATCGGCGCTCGGCGCCGTAACGGTCGCGCTCCTTTACCAACG
CTATTTCCGCAAGTTATTCG

Downstream 100 bases:

>100_bases
AACTCTCTGTCGTCATACCGCTCATGAACGAGGCCGAAAGCATTGGCCCGCTCTTCGATGCGCTCGCCTCGGCGCTTCAG
GGCATCGATCACGAAATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MKLQPYRPDRNILFAGLFLIIFLSFFAGIGSGPLFDVDEGAFSEATREMLVSKNYLTTYLNGALRFDKPILVYWLQLLSI
KTFGISEFAFRLPSAVAAALWAGAIFFFVRRERNETEAILATALMALSLQVSIIAKAAIADAVLNLCLAIALTALFTHWR
TKRRSWIYIAFAAMGFGMLDKGPVAILIPIAVSFLFFLAQKELTAWFRAMLNPTAIALFLLIALPWYVLEYREQGQAFID
GFFMKHNVRRFNGSMEGHSGSLFYYIPVVLIGIMPSTGLFFGLFTKLRQRLADPLWQFCLIWFAFVFVFFSLSGTKLPHY
MIYGYTPLFILVGAELSKIERSWLLALWPTGLLLLLAALPFALEMLMPSMENLFIQAQLQGFLTEMESNHFSLLMLAAAA
LCMLLQFVPALAPSMRFIIGGALLTFSFNFVAMPMAARVMQEPVKEAAQLARKEQLKIVMWKVYYPSFFVYSGSFAERRF
PEPGDVVLTTIDRLEKLGPVERLYGRNGIMLVRMPTQPTSR

Sequences:

>Translated_521_residues
MKLQPYRPDRNILFAGLFLIIFLSFFAGIGSGPLFDVDEGAFSEATREMLVSKNYLTTYLNGALRFDKPILVYWLQLLSI
KTFGISEFAFRLPSAVAAALWAGAIFFFVRRERNETEAILATALMALSLQVSIIAKAAIADAVLNLCLAIALTALFTHWR
TKRRSWIYIAFAAMGFGMLDKGPVAILIPIAVSFLFFLAQKELTAWFRAMLNPTAIALFLLIALPWYVLEYREQGQAFID
GFFMKHNVRRFNGSMEGHSGSLFYYIPVVLIGIMPSTGLFFGLFTKLRQRLADPLWQFCLIWFAFVFVFFSLSGTKLPHY
MIYGYTPLFILVGAELSKIERSWLLALWPTGLLLLLAALPFALEMLMPSMENLFIQAQLQGFLTEMESNHFSLLMLAAAA
LCMLLQFVPALAPSMRFIIGGALLTFSFNFVAMPMAARVMQEPVKEAAQLARKEQLKIVMWKVYYPSFFVYSGSFAERRF
PEPGDVVLTTIDRLEKLGPVERLYGRNGIMLVRMPTQPTSR
>Mature_521_residues
MKLQPYRPDRNILFAGLFLIIFLSFFAGIGSGPLFDVDEGAFSEATREMLVSKNYLTTYLNGALRFDKPILVYWLQLLSI
KTFGISEFAFRLPSAVAAALWAGAIFFFVRRERNETEAILATALMALSLQVSIIAKAAIADAVLNLCLAIALTALFTHWR
TKRRSWIYIAFAAMGFGMLDKGPVAILIPIAVSFLFFLAQKELTAWFRAMLNPTAIALFLLIALPWYVLEYREQGQAFID
GFFMKHNVRRFNGSMEGHSGSLFYYIPVVLIGIMPSTGLFFGLFTKLRQRLADPLWQFCLIWFAFVFVFFSLSGTKLPHY
MIYGYTPLFILVGAELSKIERSWLLALWPTGLLLLLAALPFALEMLMPSMENLFIQAQLQGFLTEMESNHFSLLMLAAAA
LCMLLQFVPALAPSMRFIIGGALLTFSFNFVAMPMAARVMQEPVKEAAQLARKEQLKIVMWKVYYPSFFVYSGSFAERRF
PEPGDVVLTTIDRLEKLGPVERLYGRNGIMLVRMPTQPTSR

Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 83 family [H]

Homologues:

Organism=Escherichia coli, GI1788591, Length=324, Percent_Identity=26.8518518518519, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022839
- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: =2.4.2.43 [H]

Molecular weight: Translated: 58910; Mature: 58910

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQPYRPDRNILFAGLFLIIFLSFFAGIGSGPLFDVDEGAFSEATREMLVSKNYLTTYL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHH
NGALRFDKPILVYWLQLLSIKTFGISEFAFRLPSAVAAALWAGAIFFFVRRERNETEAIL
CCHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ATALMALSLQVSIIAKAAIADAVLNLCLAIALTALFTHWRTKRRSWIYIAFAAMGFGMLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCC
KGPVAILIPIAVSFLFFLAQKELTAWFRAMLNPTAIALFLLIALPWYVLEYREQGQAFID
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
GFFMKHNVRRFNGSMEGHSGSLFYYIPVVLIGIMPSTGLFFGLFTKLRQRLADPLWQFCL
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IWFAFVFVFFSLSGTKLPHYMIYGYTPLFILVGAELSKIERSWLLALWPTGLLLLLAALP
HHHHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FALEMLMPSMENLFIQAQLQGFLTEMESNHFSLLMLAAAALCMLLQFVPALAPSMRFIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALLTFSFNFVAMPMAARVMQEPVKEAAQLARKEQLKIVMWKVYYPSFFVYSGSFAERRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEECCEEEEEECCHHHCCC
PEPGDVVLTTIDRLEKLGPVERLYGRNGIMLVRMPTQPTSR
CCCCCHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MKLQPYRPDRNILFAGLFLIIFLSFFAGIGSGPLFDVDEGAFSEATREMLVSKNYLTTYL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHH
NGALRFDKPILVYWLQLLSIKTFGISEFAFRLPSAVAAALWAGAIFFFVRRERNETEAIL
CCHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ATALMALSLQVSIIAKAAIADAVLNLCLAIALTALFTHWRTKRRSWIYIAFAAMGFGMLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCC
KGPVAILIPIAVSFLFFLAQKELTAWFRAMLNPTAIALFLLIALPWYVLEYREQGQAFID
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
GFFMKHNVRRFNGSMEGHSGSLFYYIPVVLIGIMPSTGLFFGLFTKLRQRLADPLWQFCL
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IWFAFVFVFFSLSGTKLPHYMIYGYTPLFILVGAELSKIERSWLLALWPTGLLLLLAALP
HHHHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FALEMLMPSMENLFIQAQLQGFLTEMESNHFSLLMLAAAALCMLLQFVPALAPSMRFIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALLTFSFNFVAMPMAARVMQEPVKEAAQLARKEQLKIVMWKVYYPSFFVYSGSFAERRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEECCEEEEEECCHHHCCC
PEPGDVVLTTIDRLEKLGPVERLYGRNGIMLVRMPTQPTSR
CCCCCHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA