| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is doc
Identifier: 21673172
GI number: 21673172
Start: 348464
End: 348847
Strand: Direct
Name: doc
Synonym: CT0333
Alternate gene names: NA
Gene position: 348464-348847 (Clockwise)
Preceding gene: 21673171
Following gene: 21673173
Centisome position: 16.17
GC content: 51.82
Gene sequence:
>384_bases ATGAGATTTCTGGACCTTCACGAGGTTCTGCACATCCATCGCGATCAGATCACCCGTTATGGCGGAACGCTCGGCGTCCG GGATATGGGCCTGCTCACCTCGGCGATTGCCATGCCGACGGCGATGTTCAAAGGCGATTTTCTGCATACCGACATTTATG AAATGGCTGCGGCATACCTTTTCCACTTGGTGAGGAATCACCCGTTTCTTGACGGAAACAAACGGGTTGGCGCGGTGTCA GCCATCGTTTTCCTCGCGTTGAACGGATACGATTTCGAAGCGCCGGAAAATGATCTCGTCGAAATGGTTTACGGCGTGGC GAGAAGTGAGTTTGAAAAATCTGATGTTGCGCTGTTTATGAGGAGATGGAGCGTGAAATGGTGA
Upstream 100 bases:
>100_bases GCCGTTGAAAAATCCCAAAGGGGGCGAGGCGTTCGGTGTGGCGCTTGAAAAGGTGAATACCCGTTATGCCAGGGCGTTGA AAAAACTTGCAGAATAGGTG
Downstream 100 bases:
>100_bases TTGTGGATGAGCAGTTGCATAACGTAACACTCAGGGGAAACCAAGGCTTTTCCTGACGCACATGGCTCTGAGGCCTTGAT TTCATAAGTCCCTTTCTATT
Product: Doc protein
Products: NA
Alternate protein names: Death On Curing Protein; Death-On-Curing Protein; Prophage Maintenance System Killer Protein; Phage Death On Curing Protein; Xin-Antitoxin System Toxin Component Fic Family; Fic Family xin-Antitoxin System Toxin Component; Death On Curing xin Protein Doc; Filamentation Induced By CAMP Protein Fic; Death-On-Curing Protein DOC; Death ON Curing Protein; Doc Protein; Phage Maintenance Killer Protein; Bacteriophage Protein; Addiction Module xin
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MRFLDLHEVLHIHRDQITRYGGTLGVRDMGLLTSAIAMPTAMFKGDFLHTDIYEMAAAYLFHLVRNHPFLDGNKRVGAVS AIVFLALNGYDFEAPENDLVEMVYGVARSEFEKSDVALFMRRWSVKW
Sequences:
>Translated_127_residues MRFLDLHEVLHIHRDQITRYGGTLGVRDMGLLTSAIAMPTAMFKGDFLHTDIYEMAAAYLFHLVRNHPFLDGNKRVGAVS AIVFLALNGYDFEAPENDLVEMVYGVARSEFEKSDVALFMRRWSVKW >Mature_127_residues MRFLDLHEVLHIHRDQITRYGGTLGVRDMGLLTSAIAMPTAMFKGDFLHTDIYEMAAAYLFHLVRNHPFLDGNKRVGAVS AIVFLALNGYDFEAPENDLVEMVYGVARSEFEKSDVALFMRRWSVKW
Specific function: Unknown
COG id: COG3654
COG function: function code R; Prophage maintenance system killer protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14554; Mature: 14554
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLDLHEVLHIHRDQITRYGGTLGVRDMGLLTSAIAMPTAMFKGDFLHTDIYEMAAAYL CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH FHLVRNHPFLDGNKRVGAVSAIVFLALNGYDFEAPENDLVEMVYGVARSEFEKSDVALFM HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH RRWSVKW HHHCCCC >Mature Secondary Structure MRFLDLHEVLHIHRDQITRYGGTLGVRDMGLLTSAIAMPTAMFKGDFLHTDIYEMAAAYL CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH FHLVRNHPFLDGNKRVGAVSAIVFLALNGYDFEAPENDLVEMVYGVARSEFEKSDVALFM HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH RRWSVKW HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA