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The map label for this gene is 21673162

Identifier: 21673162

GI number: 21673162

Start: 338991

End: 340934

Strand: Direct

Name: 21673162

Synonym: CT0323

Alternate gene names: NA

Gene position: 338991-340934 (Clockwise)

Preceding gene: 21673159

Following gene: 21673171

Centisome position: 15.73

GC content: 63.07

Gene sequence:

>1944_bases
ATGCAGCGACGCGAGTTTTTCCAGCATTTCCTCAAACGCGCCGGTATCGGGGCGGGCGCTCTCGGTGCCGCAACCGCCGG
TCTTGTCGGCTATTACCAACCGCGCAAGGAGGTCTTCGACACCTCCGGCAAGAACAACGACGAGCTGGCAGAAAAGCTGA
CGACGCCTAAAAAAGCGGTGGTGATTGGCGGCGGGCTGGCGGGCATCAGCTCGGCGCTGGAACTTGCGCGTCGGAACTTC
GAGGTGACGCTGGTCGAGGCCTCGCCGTCGCTGGGCGGCAAGCTGACTGGCTGGTCCATCGAGGCGCTCGGCGAGCAGTT
CCCGGTGGAGCATGGCTTTCACGGCTTTTTCGACCAGTACTATAACCTGAACGAAATGTTCGCCTCGGCGGGCATCGGCA
GCGACATGTTCACCGCCTCGCCCGGCTATCCGGTCATCTTCAGCGACCGGCAGGTCGAGGTGTTCGGCCAGACGCCGAAG
TGGTTTCCGTTCAACATTCTCTCGGTGGTGCAGCAGTCGAAACGGCTCGACATCATGTCGTTCCTGAAGGATTATCCCGG
ACTGTGGCCGGTCATCAGCATGTTCCGCTACCAGTACGACCGCACCTTCCGCGACTGGGACAGCATTGATTTCATGACCT
ACTGCCGGCGTGGCGAGGTGCTTCCGGCCTTCATCGACACCGTGCTGCATCCTTTCTCGGACGCCACGATGAACCGCATG
GAGGTGCTCTCAGCCGCCGAGGCGATGCGTTACTTCCATTTCTACTTCATGGGCAGTCCGGAGGGGCTGGCTTTCCGGAT
CATCACGAAGGATTGCATGAGCGCCCTCATCGAGCCGCTGGAGCGCAAGATGACGTCGCTGGGCGTGCGGGTGCTGAAAG
GGCGCAAGGCACAGAACCTCGTGATGCAGGATGGGCGCGTCACGGCGGTGCGGCTCGACGGCGCGGGAGCTGCGAATGGC
GAGGTGGCGTCGATTCCGAAGCGCGAGGTGCCAGTGACCGGATGGCTGCAACACATGTCCGACGCGGGGATTCCCGTGCT
GGTGGCGCGGCGAGGTGCGTCGTGGGTGGCCCTCGACGGGCGCTGCACTCACATGGGTTGCCCGGTGGCTCCCGAAGTGT
CAACAGGAGGCTTTCATTGCCCCTGCCACGATGGCCGCTTCAACGCAGAAGGGCTTCCGGTGAGTGGCCCGCCGAAAGCG
CCGCTGCCCCGGCTCGATGTGCGGGAAGCGGGGGAGATGCTCGTCATCGGGCAGGCGTCGTCAAGCTCGTCGCCGGTGGT
TGTCACCGCTGAGGAGCTGCCGTGCGATTACTGCGTGGTGGCTTCGGGCGTGCGCGGTACCCGCGAGCTGATCGCCTTGA
CCCGGCCTGGCAACAGTGGCTTCGCCGGTCAGGTGGCCGCGCTTGGTGAGGCCGATCCCTACGTCGTCTGGCGCGTTTGG
CTCGACCGCCCGTTACCATCCGCCGACTTTCCGTTCTACACCGTCTCGGGCTACACCTACACCGACTCGATCACCTTTTA
TTCGAGCTTTCAGCAGCCCTTCATCGACTGGGCCAAGCGCACCGGTGGCTGCGTCGTCGAGCTGCACGCCTACGCCGTCG
CGCCGCAAGACGTGCGCCCCGAGCCGGAGATCCGCGCCACGATGTTGCAAGAGCTGCACGCCATGTTCCCGGAATCGAAA
AACGCCACGATCCGGCACGAAATTTTCATGATGCAATCAAACTTCACCCGCTGGGCACCCGGCGACCATGCCAAACGCCC
CGGCGTCGAAACACCCTATGCCAACCTCTTTCTGGCGGGCGACTGGGTAAGCACCAAAGCCCCGGTTTTCCTGATGGAAG
CCGCCGTCTTCACGGGCCGTATGGCCGCCAACGCCATTTCTGCAAAAGAGTCGCTGAGGCAGAAGCCGTTGCCGATTGTG
CCGATGAACGGGATTTTTGCTTAA

Upstream 100 bases:

>100_bases
CGATTCACCATTGGTTGCGATAACATCCATTTATTCTTAAATATACGAGTCAACTTCACGTAGTTGTTTCGCAACCTTTC
GAACCGCCACCAATTCCTTC

Downstream 100 bases:

>100_bases
AACAGAAATTGAGGTCAATATCGAAAGGAAAAATCTCAAAAACAGAATTTCTCATTTTTCCTCAACACACTCCACTACCG
TATCATGCAACAGTGGTCGG

Product: gamma-carotene desaturase

Products: NA

Alternate protein names: Dehydrogenase; Rieske Domain-Containing Protein; Beta-Carotene Desaturase/Methylase; Rieske Domain Protein; Gamma-Carotene Desaturase; Isorenieratene Synthase; Beta-Carotene Desaturase; Phytoene Dehydrogenase Rieske Iron-Sulfur Component; FAD Dependent Oxidoreductase; LOW QUALITY PROTEIN Dehydrogenase; UDP-Galactopyranose Mutase; Phytoene Desaturase

Number of amino acids: Translated: 647; Mature: 647

Protein sequence:

>647_residues
MQRREFFQHFLKRAGIGAGALGAATAGLVGYYQPRKEVFDTSGKNNDELAEKLTTPKKAVVIGGGLAGISSALELARRNF
EVTLVEASPSLGGKLTGWSIEALGEQFPVEHGFHGFFDQYYNLNEMFASAGIGSDMFTASPGYPVIFSDRQVEVFGQTPK
WFPFNILSVVQQSKRLDIMSFLKDYPGLWPVISMFRYQYDRTFRDWDSIDFMTYCRRGEVLPAFIDTVLHPFSDATMNRM
EVLSAAEAMRYFHFYFMGSPEGLAFRIITKDCMSALIEPLERKMTSLGVRVLKGRKAQNLVMQDGRVTAVRLDGAGAANG
EVASIPKREVPVTGWLQHMSDAGIPVLVARRGASWVALDGRCTHMGCPVAPEVSTGGFHCPCHDGRFNAEGLPVSGPPKA
PLPRLDVREAGEMLVIGQASSSSSPVVVTAEELPCDYCVVASGVRGTRELIALTRPGNSGFAGQVAALGEADPYVVWRVW
LDRPLPSADFPFYTVSGYTYTDSITFYSSFQQPFIDWAKRTGGCVVELHAYAVAPQDVRPEPEIRATMLQELHAMFPESK
NATIRHEIFMMQSNFTRWAPGDHAKRPGVETPYANLFLAGDWVSTKAPVFLMEAAVFTGRMAANAISAKESLRQKPLPIV
PMNGIFA

Sequences:

>Translated_647_residues
MQRREFFQHFLKRAGIGAGALGAATAGLVGYYQPRKEVFDTSGKNNDELAEKLTTPKKAVVIGGGLAGISSALELARRNF
EVTLVEASPSLGGKLTGWSIEALGEQFPVEHGFHGFFDQYYNLNEMFASAGIGSDMFTASPGYPVIFSDRQVEVFGQTPK
WFPFNILSVVQQSKRLDIMSFLKDYPGLWPVISMFRYQYDRTFRDWDSIDFMTYCRRGEVLPAFIDTVLHPFSDATMNRM
EVLSAAEAMRYFHFYFMGSPEGLAFRIITKDCMSALIEPLERKMTSLGVRVLKGRKAQNLVMQDGRVTAVRLDGAGAANG
EVASIPKREVPVTGWLQHMSDAGIPVLVARRGASWVALDGRCTHMGCPVAPEVSTGGFHCPCHDGRFNAEGLPVSGPPKA
PLPRLDVREAGEMLVIGQASSSSSPVVVTAEELPCDYCVVASGVRGTRELIALTRPGNSGFAGQVAALGEADPYVVWRVW
LDRPLPSADFPFYTVSGYTYTDSITFYSSFQQPFIDWAKRTGGCVVELHAYAVAPQDVRPEPEIRATMLQELHAMFPESK
NATIRHEIFMMQSNFTRWAPGDHAKRPGVETPYANLFLAGDWVSTKAPVFLMEAAVFTGRMAANAISAKESLRQKPLPIV
PMNGIFA
>Mature_647_residues
MQRREFFQHFLKRAGIGAGALGAATAGLVGYYQPRKEVFDTSGKNNDELAEKLTTPKKAVVIGGGLAGISSALELARRNF
EVTLVEASPSLGGKLTGWSIEALGEQFPVEHGFHGFFDQYYNLNEMFASAGIGSDMFTASPGYPVIFSDRQVEVFGQTPK
WFPFNILSVVQQSKRLDIMSFLKDYPGLWPVISMFRYQYDRTFRDWDSIDFMTYCRRGEVLPAFIDTVLHPFSDATMNRM
EVLSAAEAMRYFHFYFMGSPEGLAFRIITKDCMSALIEPLERKMTSLGVRVLKGRKAQNLVMQDGRVTAVRLDGAGAANG
EVASIPKREVPVTGWLQHMSDAGIPVLVARRGASWVALDGRCTHMGCPVAPEVSTGGFHCPCHDGRFNAEGLPVSGPPKA
PLPRLDVREAGEMLVIGQASSSSSPVVVTAEELPCDYCVVASGVRGTRELIALTRPGNSGFAGQVAALGEADPYVVWRVW
LDRPLPSADFPFYTVSGYTYTDSITFYSSFQQPFIDWAKRTGGCVVELHAYAVAPQDVRPEPEIRATMLQELHAMFPESK
NATIRHEIFMMQSNFTRWAPGDHAKRPGVETPYANLFLAGDWVSTKAPVFLMEAAVFTGRMAANAISAKESLRQKPLPIV
PMNGIFA

Specific function: Unknown

COG id: COG3349

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71204; Mature: 71204

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRREFFQHFLKRAGIGAGALGAATAGLVGYYQPRKEVFDTSGKNNDELAEKLTTPKKAV
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHCCCCEEE
VIGGGLAGISSALELARRNFEVTLVEASPSLGGKLTGWSIEALGEQFPVEHGFHGFFDQY
EEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCEECCCCHHHHHHHCCCCCCCHHHHHHH
YNLNEMFASAGIGSDMFTASPGYPVIFSDRQVEVFGQTPKWFPFNILSVVQQSKRLDIMS
CCHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCHHHHHHHHHHHCHHHHH
FLKDYPGLWPVISMFRYQYDRTFRDWDSIDFMTYCRRGEVLPAFIDTVLHPFSDATMNRM
HHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHH
EVLSAAEAMRYFHFYFMGSPEGLAFRIITKDCMSALIEPLERKMTSLGVRVLKGRKAQNL
HHHHHHHHHHHEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VMQDGRVTAVRLDGAGAANGEVASIPKREVPVTGWLQHMSDAGIPVLVARRGASWVALDG
EECCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEECC
RCTHMGCPVAPEVSTGGFHCPCHDGRFNAEGLPVSGPPKAPLPRLDVREAGEMLVIGQAS
EEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEECC
SSSSPVVVTAEELPCDYCVVASGVRGTRELIALTRPGNSGFAGQVAALGEADPYVVWRVW
CCCCCEEEEHHHCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCEEECCCCCCEEEEEEE
LDRPLPSADFPFYTVSGYTYTDSITFYSSFQQPFIDWAKRTGGCVVELHAYAVAPQDVRP
ECCCCCCCCCCEEEECCEEEECCEEEHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCC
EPEIRATMLQELHAMFPESKNATIRHEIFMMQSNFTRWAPGDHAKRPGVETPYANLFLAG
CCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEC
DWVSTKAPVFLMEAAVFTGRMAANAISAKESLRQKPLPIVPMNGIFA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC
>Mature Secondary Structure
MQRREFFQHFLKRAGIGAGALGAATAGLVGYYQPRKEVFDTSGKNNDELAEKLTTPKKAV
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHCCCCEEE
VIGGGLAGISSALELARRNFEVTLVEASPSLGGKLTGWSIEALGEQFPVEHGFHGFFDQY
EEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCEECCCCHHHHHHHCCCCCCCHHHHHHH
YNLNEMFASAGIGSDMFTASPGYPVIFSDRQVEVFGQTPKWFPFNILSVVQQSKRLDIMS
CCHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCHHHHHHHHHHHCHHHHH
FLKDYPGLWPVISMFRYQYDRTFRDWDSIDFMTYCRRGEVLPAFIDTVLHPFSDATMNRM
HHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHH
EVLSAAEAMRYFHFYFMGSPEGLAFRIITKDCMSALIEPLERKMTSLGVRVLKGRKAQNL
HHHHHHHHHHHEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VMQDGRVTAVRLDGAGAANGEVASIPKREVPVTGWLQHMSDAGIPVLVARRGASWVALDG
EECCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEECC
RCTHMGCPVAPEVSTGGFHCPCHDGRFNAEGLPVSGPPKAPLPRLDVREAGEMLVIGQAS
EEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEECC
SSSSPVVVTAEELPCDYCVVASGVRGTRELIALTRPGNSGFAGQVAALGEADPYVVWRVW
CCCCCEEEEHHHCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCEEECCCCCCEEEEEEE
LDRPLPSADFPFYTVSGYTYTDSITFYSSFQQPFIDWAKRTGGCVVELHAYAVAPQDVRP
ECCCCCCCCCCEEEECCEEEECCEEEHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCC
EPEIRATMLQELHAMFPESKNATIRHEIFMMQSNFTRWAPGDHAKRPGVETPYANLFLAG
CCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEC
DWVSTKAPVFLMEAAVFTGRMAANAISAKESLRQKPLPIVPMNGIFA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA