| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is purH [H]
Identifier: 21673159
GI number: 21673159
Start: 335653
End: 337224
Strand: Direct
Name: purH [H]
Synonym: CT0320
Alternate gene names: 21673159
Gene position: 335653-337224 (Clockwise)
Preceding gene: 21673154
Following gene: 21673162
Centisome position: 15.58
GC content: 59.54
Gene sequence:
>1572_bases ATGCTTGATCCTGTCATCAAACGGGCGCTCGTGTCCGTTTCCGACAAAACCGGCATCGTCGATTTCTGCCGCGAACTGGC CTCGATGGATGTCGAAATCTTCTCCACCGGTGGCACGCTGAAATTACTTCAAGGTGCTGGTATCGTCGCGCAATCCATTT CGACCATCACCGGTTTTCCGGAGATCATGGACGGCAGGGTCAAGACGCTTCATCCGAAAATCCACGGTGGTCTGCTTGCC GTGCGCGACAACGCCGAGCACCAGAAGGCGGCCCGCGAGAACGGTATCCAGTTCATCGATCTCGTGGTGGTGAACCTCTA TCCCTTCGAGGCAACTATCGCCAAAGCGGATGTGACTTTCGAGGAGGCTATTGAAAATATCGATATTGGTGGCCCATCGA TGCTGCGCAGCGCGGCCAAGAACAACGAGTCGGTCACGGTGGTTACCGATGTCGCCGACTACGCCACCGTGCTTGACGAA ATGCGCTCGAACGGTGGCGCGACCACGCGGGCCACCCGTCTGACGCTCGCGGCCAAAGTGTACGCGCTGACCTCGCGCTA CGACACGGCCATTGCGGCCTACATGGCTAAAGCCGCTGGAGTCAAGGGCGCGGGCGACACGATGACCCTCAAGCTCGAAA AAGAGCTGAGCATGCGCTACGGCGAGAACCCGCACCAGAGCGCCGGACTCTACAAAATGGACGATGGCAACGGCGTGCGT TCGTTCAGCGCGATTTTCGAGAAGCTGCACGGTAAAGAGTTGTCGTATAACAATATGCTTGACATCGCCGCTGCGACTGG TATCATCGAGGAGTTTCGCGGCGAGGAGCCGTCGGTGGTGATTGTCAAGCACACCAATCCGTGCGGCGTCGCGCAGGCGC CGACGCTCTGCGAGGCCTACCGCAAAGCCTTCTCGACCGACACGCAGGCTCCGTTTGGCGGTATCATCGCCTTCAACCGC CCGCTCGACATGGAGACAGCCAGCGCGGTCAACGAAATCTTCACCGAGATTCTCATCGCTCCGGCTTTCGAAGATGGCGT GCTCGAGATGCTCATGAAGAAGAAGGACCGCCGTCTCGTGCTCCAGAAGCAGCCGTTGCCGAAAGCTGGCTGGGAGTTCA AGTCCACGCCGTTCGGCATGCTCGTGCAGGAGCGCGACAGTAAGACGGTTGCTCCTGAAGAGCTGAAGGTGGTCACGAAG CGCCAGCCGACCGCTGAAGAGCTGGCCGACCTGATGTTCGCCTGGAAGATCGTGCGGCACATCAAATCCAACACGATCCT CTACGTCAAGAACCGCCAGACCTTCGGCGTCGGCGCGGGCCAGATGTCGCGCGTCGATTCATCGAAAATCGCCCGCTGGA AAGCCTCGGAAGTGGCCCTCGATCTCAGGGGATCGGTTGTCGCCTCCGACGCCTTCTTCCCCTTCGCCGATGGCCTTCTC GCTGCCGCTGAAGCTGGGGTAACCGCCGTCATCCAGCCGGGTGGTTCGATCCGCGACAACGAAGTCATCGAAGCCGCCGA CGCCAACAATCTCGCAATGGTCTTCACCGGAATGCGCCATTTCAAGCACTGA
Upstream 100 bases:
>100_bases GTGCCTGCGCGGAGTTGCAGTTCTCCGGTCGGTATAGTCGCGGATTTTTGTAAATTCCCGGTCTATTTTTGATTTCCGAA CACAACACAACTCTCTGCTC
Downstream 100 bases:
>100_bases GGTAGCAGAAAAAGACAGAGAACTGCAAGGGCAGCAGGAACAACGTGATGAGCGTTGTTCCTGCTGCCTTTTTGTTTTTA CTGCTATTCCGGGATTGTAT
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MLDPVIKRALVSVSDKTGIVDFCRELASMDVEIFSTGGTLKLLQGAGIVAQSISTITGFPEIMDGRVKTLHPKIHGGLLA VRDNAEHQKAARENGIQFIDLVVVNLYPFEATIAKADVTFEEAIENIDIGGPSMLRSAAKNNESVTVVTDVADYATVLDE MRSNGGATTRATRLTLAAKVYALTSRYDTAIAAYMAKAAGVKGAGDTMTLKLEKELSMRYGENPHQSAGLYKMDDGNGVR SFSAIFEKLHGKELSYNNMLDIAAATGIIEEFRGEEPSVVIVKHTNPCGVAQAPTLCEAYRKAFSTDTQAPFGGIIAFNR PLDMETASAVNEIFTEILIAPAFEDGVLEMLMKKKDRRLVLQKQPLPKAGWEFKSTPFGMLVQERDSKTVAPEELKVVTK RQPTAEELADLMFAWKIVRHIKSNTILYVKNRQTFGVGAGQMSRVDSSKIARWKASEVALDLRGSVVASDAFFPFADGLL AAAEAGVTAVIQPGGSIRDNEVIEAADANNLAMVFTGMRHFKH
Sequences:
>Translated_523_residues MLDPVIKRALVSVSDKTGIVDFCRELASMDVEIFSTGGTLKLLQGAGIVAQSISTITGFPEIMDGRVKTLHPKIHGGLLA VRDNAEHQKAARENGIQFIDLVVVNLYPFEATIAKADVTFEEAIENIDIGGPSMLRSAAKNNESVTVVTDVADYATVLDE MRSNGGATTRATRLTLAAKVYALTSRYDTAIAAYMAKAAGVKGAGDTMTLKLEKELSMRYGENPHQSAGLYKMDDGNGVR SFSAIFEKLHGKELSYNNMLDIAAATGIIEEFRGEEPSVVIVKHTNPCGVAQAPTLCEAYRKAFSTDTQAPFGGIIAFNR PLDMETASAVNEIFTEILIAPAFEDGVLEMLMKKKDRRLVLQKQPLPKAGWEFKSTPFGMLVQERDSKTVAPEELKVVTK RQPTAEELADLMFAWKIVRHIKSNTILYVKNRQTFGVGAGQMSRVDSSKIARWKASEVALDLRGSVVASDAFFPFADGLL AAAEAGVTAVIQPGGSIRDNEVIEAADANNLAMVFTGMRHFKH >Mature_523_residues MLDPVIKRALVSVSDKTGIVDFCRELASMDVEIFSTGGTLKLLQGAGIVAQSISTITGFPEIMDGRVKTLHPKIHGGLLA VRDNAEHQKAARENGIQFIDLVVVNLYPFEATIAKADVTFEEAIENIDIGGPSMLRSAAKNNESVTVVTDVADYATVLDE MRSNGGATTRATRLTLAAKVYALTSRYDTAIAAYMAKAAGVKGAGDTMTLKLEKELSMRYGENPHQSAGLYKMDDGNGVR SFSAIFEKLHGKELSYNNMLDIAAATGIIEEFRGEEPSVVIVKHTNPCGVAQAPTLCEAYRKAFSTDTQAPFGGIIAFNR PLDMETASAVNEIFTEILIAPAFEDGVLEMLMKKKDRRLVLQKQPLPKAGWEFKSTPFGMLVQERDSKTVAPEELKVVTK RQPTAEELADLMFAWKIVRHIKSNTILYVKNRQTFGVGAGQMSRVDSSKIARWKASEVALDLRGSVVASDAFFPFADGLL AAAEAGVTAVIQPGGSIRDNEVIEAADANNLAMVFTGMRHFKH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=480, Percent_Identity=35.625, Blast_Score=249, Evalue=5e-66, Organism=Escherichia coli, GI1790439, Length=529, Percent_Identity=49.9054820415879, Blast_Score=494, Evalue=1e-141, Organism=Caenorhabditis elegans, GI71985564, Length=613, Percent_Identity=31.810766721044, Blast_Score=284, Evalue=8e-77, Organism=Caenorhabditis elegans, GI71985574, Length=352, Percent_Identity=25.5681818181818, Blast_Score=89, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6323768, Length=476, Percent_Identity=34.0336134453782, Blast_Score=241, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6323056, Length=475, Percent_Identity=32.4210526315789, Blast_Score=234, Evalue=2e-62, Organism=Drosophila melanogaster, GI24649832, Length=487, Percent_Identity=34.7022587268994, Blast_Score=258, Evalue=1e-68,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 56744; Mature: 56744
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDPVIKRALVSVSDKTGIVDFCRELASMDVEIFSTGGTLKLLQGAGIVAQSISTITGFP CCCHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCCEEEECCCCHHHHHHHHHCCCH EIMDGRVKTLHPKIHGGLLAVRDNAEHQKAARENGIQFIDLVVVNLYPFEATIAKADVTF HHHCCCCEEECHHHCCCEEEEECCCHHHHHHHHCCCEEEEEEEEEEECCHHEEEECCCCH EEAIENIDIGGPSMLRSAAKNNESVTVVTDVADYATVLDEMRSNGGATTRATRLTLAAKV HHHHHHCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YALTSRYDTAIAAYMAKAAGVKGAGDTMTLKLEKELSMRYGENPHQSAGLYKMDDGNGVR HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHCCCCCCCCCCEEEECCCCCHH SFSAIFEKLHGKELSYNNMLDIAAATGIIEEFRGEEPSVVIVKHTNPCGVAQAPTLCEAY HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHH RKAFSTDTQAPFGGIIAFNRPLDMETASAVNEIFTEILIAPAFEDGVLEMLMKKKDRRLV HHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEE LQKQPLPKAGWEFKSTPFGMLVQERDSKTVAPEELKVVTKRQPTAEELADLMFAWKIVRH EECCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH IKSNTILYVKNRQTFGVGAGQMSRVDSSKIARWKASEVALDLRGSVVASDAFFPFADGLL HCCCEEEEEECCCEECCCCCHHHHCCHHHHHHEEHHHEEEECCCCEEECCCCCHHHHHHH AAAEAGVTAVIQPGGSIRDNEVIEAADANNLAMVFTGMRHFKH HHHHCCCEEEECCCCCCCCCCEEEECCCCCEEEEEECHHHHCC >Mature Secondary Structure MLDPVIKRALVSVSDKTGIVDFCRELASMDVEIFSTGGTLKLLQGAGIVAQSISTITGFP CCCHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCCEEEECCCCHHHHHHHHHCCCH EIMDGRVKTLHPKIHGGLLAVRDNAEHQKAARENGIQFIDLVVVNLYPFEATIAKADVTF HHHCCCCEEECHHHCCCEEEEECCCHHHHHHHHCCCEEEEEEEEEEECCHHEEEECCCCH EEAIENIDIGGPSMLRSAAKNNESVTVVTDVADYATVLDEMRSNGGATTRATRLTLAAKV HHHHHHCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YALTSRYDTAIAAYMAKAAGVKGAGDTMTLKLEKELSMRYGENPHQSAGLYKMDDGNGVR HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHCCCCCCCCCCEEEECCCCCHH SFSAIFEKLHGKELSYNNMLDIAAATGIIEEFRGEEPSVVIVKHTNPCGVAQAPTLCEAY HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHH RKAFSTDTQAPFGGIIAFNRPLDMETASAVNEIFTEILIAPAFEDGVLEMLMKKKDRRLV HHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEE LQKQPLPKAGWEFKSTPFGMLVQERDSKTVAPEELKVVTKRQPTAEELADLMFAWKIVRH EECCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH IKSNTILYVKNRQTFGVGAGQMSRVDSSKIARWKASEVALDLRGSVVASDAFFPFADGLL HCCCEEEEEECCCEECCCCCHHHHCCHHHHHHEEHHHEEEECCCCEEECCCCCHHHHHHH AAAEAGVTAVIQPGGSIRDNEVIEAADANNLAMVFTGMRHFKH HHHHCCCEEEECCCCCCCCCCEEEECCCCCEEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA