| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is yaeT [H]
Identifier: 21673105
GI number: 21673105
Start: 277011
End: 279521
Strand: Reverse
Name: yaeT [H]
Synonym: CT0266
Alternate gene names: 21673105
Gene position: 279521-277011 (Counterclockwise)
Preceding gene: 21673106
Following gene: 21673099
Centisome position: 12.97
GC content: 54.0
Gene sequence:
>2511_bases ATGAAAACGACACCATTTCCACCAGACAAGTTATCAGCACTCCTGATTGTTCTGGCTCTGCTCAACATCCCCTCATCTTC GGTTTTCGCCAAGGCAAAGCCTTCGACTCCGGCAAACGGATCCGTTACGGCGCGTCCGGCACCAGCCCCCATACAGGAAA CCCGGACGTTCACCGTTCGCGAAATTACTTTCAGCGGACTTCAGACCATCAAGGAGTCTGAATTGCTCAAAAGCCTGCCT ATCAAAATCAATGACCGGATTACTGTCCCGGGTCAGGAGATTCCCGGCGTGTTGCAATACCTTTGGAATCTGCAATATTT CAGCAATATCCAGATCGAACAAACCGATCTTGGCAGCGGCAACATCAAGCTGACCTTTGTCGTCACCGAGCTCCCTGTCC TCCAAAGCGTCGAGTTCCAGGGCAATCACAAATTCAAAACAAAGGAGTTGCTGAACACCGCCAATCTGAACCCCGGACGC CGGATAAGCAACCAGGAGCTGTTGAACGCCGAGAACAGAATTGAAAAGCAGTATGCAGCGAAAGGCTATCTGACAGCCGG CGTGGAGTACCGCCTTCAGAATATCGGCGAGAACAAAGTCAAAGCGATCTTTACCATTCACGAAGGCAGCAAGGTTGTCA TCGAAAAAATCCGCTTCCACGGCAATACAGCTTTCAAAGAGAGCAAACTCCGGGGAGTTCTCAAAGAGACCTCGCAGAAC TCCTGGTGGCGCAAGATTTTCGGCCAGCCGAAGCTCGACAAGGACAAGTTCGAGGAGGACAAGAACCTGCTGGTTGAATT CTATCGCGACAATGGCTATCGCGACGCGCGCATCGTCAAGGACACGATCACCTACACCGACGACAAAAAGGGGCTGATCC TCGATATTTACGTCGATGAGGGGCCGAAATACCACATCCGGAACATCACCTGGATCGGTAACACCAAGGATTTCGCCACG ACCCAGATACTTGACACAACGTTCGGCATCAAAAAGGGCGACTTGTATAACGCCAAAAAGATCAACGAACGCCTGAATTT TTCGCAGGATCACTCCGACGTCAGTTCTCTCTACCTCGACCGGGGCTACCTGTCGTTCAGGGCGCAGCTCGAAGAGCAGG TGGTACAGCCAAATCAGGTCGATCTGGTCATCACCCTGACCGAAGGCGACCCTTACACGCTGAACATCATCAACATCAAG GGAAATACCAAAACAAAGGATCACGTCATCCGGCGGGAACTCTATACCATTCCGGGCGATACCTTCAGCCGGAAGAACGT CGTCAGAAGCATCAGGGAGCTCTCGATGCTCAACTATTTCGACCCTGAAACCCTGACACCGGACATCCAGCCGAACGCAA AAAACGACACGGTCGATCTGACCTACAACGTCACTGAACGGCAGACCGACACCTTCAACGCTGCCATCGGCTACAGCGCT TCGAGCGGCGGCACCGGCTCGCTCGGCCTGACCTTCCACAACTTCTCGTTCGGCGACCTGTTCAATCCTTCGGCATACCA CCCCCTGCCTCACGGCGACGGCCAGACACTTGCTTTGCAATGGCAGTTCGGATCGAACCACTATCGCACCCTTTCGCTGT CGGCAAGCGATCCTTGGGCGTTCGGCACCCATACCTCTCTGGGCTTCACCGCCTTCAAGACCAAGCAGACCTACGACCTG ACCAGCAGCAACCTCTCCACAAAGACGATCAACCAGTACGGCGCTGACATCACCATCGGAAGAAGACTCACCTGGCCAGA CGACTATTTCGCTATCAGCTGGCGCCTGGGTTACCTGCATACCAAGGGCGGCTTCGTCAGCTTCCTCAACGAGACGAATG CGCCTGAAGAGGCCGAGGAGTTCTCGATCACCCAGACAATCAGCAGAAACAGTATCGACAACCCGATCTATCCGCGACAT GGAAGCAAAAACGTCTTTACCGCTCAGCTGGCTGGAGGCGTGTTACCCGGAACAATCAACTTCTACAAACTGATCGGAAA AACAAGCTGGTTTTTCCCGGTTTCGCACAACCTGGTCGTGAACGTCGCGGCGCAGCAGGGATACCTCAACACCTTCAGCA AGGACGACTATATCCCTTACACCGACTACTTCTACATGGGTGGCAGCGGCATGTCATCCCTGCCGACCATTCCGCTCAGG GGTTATCCCGACCACAGCCTCGGTCAGCAGTTCGAGGGTGAAACCGATCTGTACGGCGGACGAGTCTATTCAAAGTTTAC CACCGAAGTTCGATATCCGCTCACGCTGAGTTCATCGGCAAGCATCTATGCCCTGGCGTTTGCCGAAGCGGGCAACCTCT GGGCCAGCGCCTCCGACTTCAATTTGACCGATCTGAAAAAATCAGCCGGTATCGGTCTGCGGCTCTATCTGCCAATCATC GGCCAGATCGGCATCGACTACGGTTACGGCTTTGACTCCGTCCCGTCTGAACCGGGCAAAAAGCCGCAGGGCTGGAACTT TACCTTCTCGTTCGGTCAGCCCAACGACTGA
Upstream 100 bases:
>100_bases TTCAAAAACGCGAACGGCGGTTTGGCAAAACCAGCGAGCAACTGAAGACCAATGAAGTAGAATAACACCGAACTGAACCA CAGAACCAATCAGCCCTTTC
Downstream 100 bases:
>100_bases CCGCTCTTTTCTGGAAACTAAAAAAGCCATGACTAAAAAGTTTTTAGTCATGGCTTTTTTATGGCTCCGAAAGGATTTGG CGGGCACACTAATGGAGGCT
Product: surface antigen family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 836; Mature: 836
Protein sequence:
>836_residues MKTTPFPPDKLSALLIVLALLNIPSSSVFAKAKPSTPANGSVTARPAPAPIQETRTFTVREITFSGLQTIKESELLKSLP IKINDRITVPGQEIPGVLQYLWNLQYFSNIQIEQTDLGSGNIKLTFVVTELPVLQSVEFQGNHKFKTKELLNTANLNPGR RISNQELLNAENRIEKQYAAKGYLTAGVEYRLQNIGENKVKAIFTIHEGSKVVIEKIRFHGNTAFKESKLRGVLKETSQN SWWRKIFGQPKLDKDKFEEDKNLLVEFYRDNGYRDARIVKDTITYTDDKKGLILDIYVDEGPKYHIRNITWIGNTKDFAT TQILDTTFGIKKGDLYNAKKINERLNFSQDHSDVSSLYLDRGYLSFRAQLEEQVVQPNQVDLVITLTEGDPYTLNIINIK GNTKTKDHVIRRELYTIPGDTFSRKNVVRSIRELSMLNYFDPETLTPDIQPNAKNDTVDLTYNVTERQTDTFNAAIGYSA SSGGTGSLGLTFHNFSFGDLFNPSAYHPLPHGDGQTLALQWQFGSNHYRTLSLSASDPWAFGTHTSLGFTAFKTKQTYDL TSSNLSTKTINQYGADITIGRRLTWPDDYFAISWRLGYLHTKGGFVSFLNETNAPEEAEEFSITQTISRNSIDNPIYPRH GSKNVFTAQLAGGVLPGTINFYKLIGKTSWFFPVSHNLVVNVAAQQGYLNTFSKDDYIPYTDYFYMGGSGMSSLPTIPLR GYPDHSLGQQFEGETDLYGGRVYSKFTTEVRYPLTLSSSASIYALAFAEAGNLWASASDFNLTDLKKSAGIGLRLYLPII GQIGIDYGYGFDSVPSEPGKKPQGWNFTFSFGQPND
Sequences:
>Translated_836_residues MKTTPFPPDKLSALLIVLALLNIPSSSVFAKAKPSTPANGSVTARPAPAPIQETRTFTVREITFSGLQTIKESELLKSLP IKINDRITVPGQEIPGVLQYLWNLQYFSNIQIEQTDLGSGNIKLTFVVTELPVLQSVEFQGNHKFKTKELLNTANLNPGR RISNQELLNAENRIEKQYAAKGYLTAGVEYRLQNIGENKVKAIFTIHEGSKVVIEKIRFHGNTAFKESKLRGVLKETSQN SWWRKIFGQPKLDKDKFEEDKNLLVEFYRDNGYRDARIVKDTITYTDDKKGLILDIYVDEGPKYHIRNITWIGNTKDFAT TQILDTTFGIKKGDLYNAKKINERLNFSQDHSDVSSLYLDRGYLSFRAQLEEQVVQPNQVDLVITLTEGDPYTLNIINIK GNTKTKDHVIRRELYTIPGDTFSRKNVVRSIRELSMLNYFDPETLTPDIQPNAKNDTVDLTYNVTERQTDTFNAAIGYSA SSGGTGSLGLTFHNFSFGDLFNPSAYHPLPHGDGQTLALQWQFGSNHYRTLSLSASDPWAFGTHTSLGFTAFKTKQTYDL TSSNLSTKTINQYGADITIGRRLTWPDDYFAISWRLGYLHTKGGFVSFLNETNAPEEAEEFSITQTISRNSIDNPIYPRH GSKNVFTAQLAGGVLPGTINFYKLIGKTSWFFPVSHNLVVNVAAQQGYLNTFSKDDYIPYTDYFYMGGSGMSSLPTIPLR GYPDHSLGQQFEGETDLYGGRVYSKFTTEVRYPLTLSSSASIYALAFAEAGNLWASASDFNLTDLKKSAGIGLRLYLPII GQIGIDYGYGFDSVPSEPGKKPQGWNFTFSFGQPND >Mature_836_residues MKTTPFPPDKLSALLIVLALLNIPSSSVFAKAKPSTPANGSVTARPAPAPIQETRTFTVREITFSGLQTIKESELLKSLP IKINDRITVPGQEIPGVLQYLWNLQYFSNIQIEQTDLGSGNIKLTFVVTELPVLQSVEFQGNHKFKTKELLNTANLNPGR RISNQELLNAENRIEKQYAAKGYLTAGVEYRLQNIGENKVKAIFTIHEGSKVVIEKIRFHGNTAFKESKLRGVLKETSQN SWWRKIFGQPKLDKDKFEEDKNLLVEFYRDNGYRDARIVKDTITYTDDKKGLILDIYVDEGPKYHIRNITWIGNTKDFAT TQILDTTFGIKKGDLYNAKKINERLNFSQDHSDVSSLYLDRGYLSFRAQLEEQVVQPNQVDLVITLTEGDPYTLNIINIK GNTKTKDHVIRRELYTIPGDTFSRKNVVRSIRELSMLNYFDPETLTPDIQPNAKNDTVDLTYNVTERQTDTFNAAIGYSA SSGGTGSLGLTFHNFSFGDLFNPSAYHPLPHGDGQTLALQWQFGSNHYRTLSLSASDPWAFGTHTSLGFTAFKTKQTYDL TSSNLSTKTINQYGADITIGRRLTWPDDYFAISWRLGYLHTKGGFVSFLNETNAPEEAEEFSITQTISRNSIDNPIYPRH GSKNVFTAQLAGGVLPGTINFYKLIGKTSWFFPVSHNLVVNVAAQQGYLNTFSKDDYIPYTDYFYMGGSGMSSLPTIPLR GYPDHSLGQQFEGETDLYGGRVYSKFTTEVRYPLTLSSSASIYALAFAEAGNLWASASDFNLTDLKKSAGIGLRLYLPII GQIGIDYGYGFDSVPSEPGKKPQGWNFTFSFGQPND
Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surface antigen D15 family [H]
Homologues:
Organism=Escherichia coli, GI1786374, Length=709, Percent_Identity=25.1057827926657, Blast_Score=181, Evalue=2e-46,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000184 - InterPro: IPR016474 - InterPro: IPR010827 [H]
Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]
EC number: NA
Molecular weight: Translated: 93747; Mature: 93747
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTPFPPDKLSALLIVLALLNIPSSSVFAKAKPSTPANGSVTARPAPAPIQETRTFTVR CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEECCCCCCCHHHCCEEEEE EITFSGLQTIKESELLKSLPIKINDRITVPGQEIPGVLQYLWNLQYFSNIQIEQTDLGSG EEEHHHHHHHHHHHHHHHCCEEECCEEECCCHHCCHHHHHHHCCHHHCCCEEEEEECCCC NIKLTFVVTELPVLQSVEFQGNHKFKTKELLNTANLNPGRRISNQELLNAENRIEKQYAA CEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHCHHHHHHHHHHH KGYLTAGVEYRLQNIGENKVKAIFTIHEGSKVVIEKIRFHGNTAFKESKLRGVLKETSQN CCEEECCHHHHHHHCCCCCEEEEEEEECCCCEEEEHHHHCCCCHHHHHHHHHHHHHCCCC SWWRKIFGQPKLDKDKFEEDKNLLVEFYRDNGYRDARIVKDTITYTDDKKGLILDIYVDE CHHHHHCCCCCCCHHHHHHHHHEEEEEEECCCCCCEEEEEEEEEEECCCCCEEEEEEECC GPKYHIRNITWIGNTKDFATTQILDTTFGIKKGDLYNAKKINERLNFSQDHSDVSSLYLD CCCEEEEEEEEECCCCCCHHHEEEHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHC RGYLSFRAQLEEQVVQPNQVDLVITLTEGDPYTLNIINIKGNTKTKDHVIRRELYTIPGD CCHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHEECCCC TFSRKNVVRSIRELSMLNYFDPETLTPDIQPNAKNDTVDLTYNVTERQTDTFNAAIGYSA CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCC SSGGTGSLGLTFHNFSFGDLFNPSAYHPLPHGDGQTLALQWQFGSNHYRTLSLSASDPWA CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCC FGTHTSLGFTAFKTKQTYDLTSSNLSTKTINQYGADITIGRRLTWPDDYFAISWRLGYLH CCCCCCCCEEEEECCCEEECCCCCCCHHHHHHCCCEEEECCEECCCCCEEEEEEEEEEEE TKGGFVSFLNETNAPEEAEEFSITQTISRNSIDNPIYPRHGSKNVFTAQLAGGVLPGTIN ECCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCH FYKLIGKTSWFFPVSHNLVVNVAAQQGYLNTFSKDDYIPYTDYFYMGGSGMSSLPTIPLR HHHHHCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC GYPDHSLGQQFEGETDLYGGRVYSKFTTEVRYPLTLSSSASIYALAFAEAGNLWASASDF CCCCHHHCCCCCCCCCCCCCEEEEEEECEEEEEEEECCCCCEEEEEEECCCCEEECCCCC NLTDLKKSAGIGLRLYLPIIGQIGIDYGYGFDSVPSEPGKKPQGWNFTFSFGQPND CHHHHHHHCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MKTTPFPPDKLSALLIVLALLNIPSSSVFAKAKPSTPANGSVTARPAPAPIQETRTFTVR CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEECCCCCCCHHHCCEEEEE EITFSGLQTIKESELLKSLPIKINDRITVPGQEIPGVLQYLWNLQYFSNIQIEQTDLGSG EEEHHHHHHHHHHHHHHHCCEEECCEEECCCHHCCHHHHHHHCCHHHCCCEEEEEECCCC NIKLTFVVTELPVLQSVEFQGNHKFKTKELLNTANLNPGRRISNQELLNAENRIEKQYAA CEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHCHHHHHHHHHHH KGYLTAGVEYRLQNIGENKVKAIFTIHEGSKVVIEKIRFHGNTAFKESKLRGVLKETSQN CCEEECCHHHHHHHCCCCCEEEEEEEECCCCEEEEHHHHCCCCHHHHHHHHHHHHHCCCC SWWRKIFGQPKLDKDKFEEDKNLLVEFYRDNGYRDARIVKDTITYTDDKKGLILDIYVDE CHHHHHCCCCCCCHHHHHHHHHEEEEEEECCCCCCEEEEEEEEEEECCCCCEEEEEEECC GPKYHIRNITWIGNTKDFATTQILDTTFGIKKGDLYNAKKINERLNFSQDHSDVSSLYLD CCCEEEEEEEEECCCCCCHHHEEEHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHC RGYLSFRAQLEEQVVQPNQVDLVITLTEGDPYTLNIINIKGNTKTKDHVIRRELYTIPGD CCHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHEECCCC TFSRKNVVRSIRELSMLNYFDPETLTPDIQPNAKNDTVDLTYNVTERQTDTFNAAIGYSA CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCC SSGGTGSLGLTFHNFSFGDLFNPSAYHPLPHGDGQTLALQWQFGSNHYRTLSLSASDPWA CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCC FGTHTSLGFTAFKTKQTYDLTSSNLSTKTINQYGADITIGRRLTWPDDYFAISWRLGYLH CCCCCCCCEEEEECCCEEECCCCCCCHHHHHHCCCEEEECCEECCCCCEEEEEEEEEEEE TKGGFVSFLNETNAPEEAEEFSITQTISRNSIDNPIYPRHGSKNVFTAQLAGGVLPGTIN ECCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCH FYKLIGKTSWFFPVSHNLVVNVAAQQGYLNTFSKDDYIPYTDYFYMGGSGMSSLPTIPLR HHHHHCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC GYPDHSLGQQFEGETDLYGGRVYSKFTTEVRYPLTLSSSASIYALAFAEAGNLWASASDF CCCCHHHCCCCCCCCCCCCCEEEEEEECEEEEEEEECCCCCEEEEEEECCCCEEECCCCC NLTDLKKSAGIGLRLYLPIIGQIGIDYGYGFDSVPSEPGKKPQGWNFTFSFGQPND CHHHHHHHCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA