| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is glmM [H]
Identifier: 21673099
GI number: 21673099
Start: 270013
End: 271443
Strand: Reverse
Name: glmM [H]
Synonym: CT0260
Alternate gene names: 21673099
Gene position: 271443-270013 (Counterclockwise)
Preceding gene: 21673105
Following gene: 21673098
Centisome position: 12.6
GC content: 61.5
Gene sequence:
>1431_bases ATGAGCTTGATGATCAGCGTCTCCGGCATCCGCGGCGTGGTCGGCAAGAGCCTCACCCCGGAAAACCTTACGGCATTCAC CATGGCCTTCGCCACCTGGATCAGGCGGCGGAAACAGGCGCTGAATCCCGGCTCGCTGGCGAAGCCGATAATCGTCATCG GCAGAGACAGCCGTCCGACCGGCGCCGTCATCACCGGTCTGGTCTCCAACGCGCTCTCGCTCTGCGGCTGCGACGTGATC GACGTCGGCATGACCACCACGCCGACAGTCGAGATCGCCACCGCCGGTGAAGGCGCCGACGGCGGCCTGATCGTCACCGC CTCGCACAACCCCGTCGAGTGGAATGCGCTGAAAATGCTTGACGAAAAGGGCGAATTCCTCACTGCGTCCGACGTCGGAG AGCTGCTCGAGATCGCCGAGAAAAAAGCGTTCGACTTCGCCCGCTGGGATGGCATCGGCACCGTGACGGCAAACGGCTCG TGGGACGCCGCACATATCGACAAAATCCTGAAGCTCTCCTGCCTCGACCTCGACCTCGTCAAAAGCATGAACTTCCGGGT GCTGATCGACGCCGTCGAAGGGGCCGGTTCGTACATCGTGCCGGAGCTGTGCCGCAAGCTGGGCATCACCGAAATCAAGA CACTCGCCTGCGAAGGCACGGGCATCTTTCCGCGCAACCCCGAGCCGATAGAGCAGAACCTCCGCCAGACGATGGCGATT CTTGCCAGCGAGAGCTGCGAGTTCGGCATCATCGTCGATCCCGACGTTGACCGGCTCGCACTGGTGTGCGAGGACGGGAC GCTCTTTGGCGAAGAATATACCCTCATCGCATGCGCCGATTTCTACCTGAAGCACCACAAAGGCCCGGTGGTCAACAACC TGTCGAGCAGCCACGCGCTCTTCGACATCGCCCGCAAGCACGAGGTCGAGTGCTTCAGCGCGAAAGTCGGCGAGGCCAAC GTAATCGAGGTGATGAAGGAGAAAGAGGCGGTAATCGGCGGCGAAGGCAACGGCGGCATCATTTTGCCGGAGCTGCACTA CGGACGCGACGCGCTCGCCGGCATCGCGCTCTTCATCCAGGCCTTCGCCGGGTGGAAATCCGCAACAGGCGGCACGCTCT CGGAGTTCCGCAAAACCTTCCCCGACTACTTCATGTCGAAAAAGAAGGTCGAACTAACGACGCTCTCGAAAGAGTCGCTC GACAGAATTTTCGACACGGTGGCGGCAAACCATCCCGATGCGGAGTGCAACCGCCTCGACGGCCTTAAGCTCGACTTCGA GAATGGATGGGTGCACCTTCGCCCCTCGAACACCGAGCCGATCGTCAGGATTTACACTGAAGCCTCGACGCAGGCAGAGG CCGACGCCCTTGCCGCGCGCTTCATCGAAGAGATCGAAACCGCCGCTTCGGCAAATCCGGCCAAGAACTGA
Upstream 100 bases:
>100_bases AGAATCCGCCAGACGGACAAGCAGGCTTCGGTGTTTTTTTCTGTATATTCCCCCCGCAACAAAACAGCATATCACTGTCA ACTCTCACGATTATAAGCCA
Downstream 100 bases:
>100_bases CAGGCATGAGAATGGGCGCAGGAGCGGCATCGGGATTCCGCACGCAGCAGGACGAAACCCTCGGCAATCGGAAAAAGGGT TCCGTTGACCGCTATATTAT
Product: phosphoglucomutase/phosphomannomutase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MSLMISVSGIRGVVGKSLTPENLTAFTMAFATWIRRRKQALNPGSLAKPIIVIGRDSRPTGAVITGLVSNALSLCGCDVI DVGMTTTPTVEIATAGEGADGGLIVTASHNPVEWNALKMLDEKGEFLTASDVGELLEIAEKKAFDFARWDGIGTVTANGS WDAAHIDKILKLSCLDLDLVKSMNFRVLIDAVEGAGSYIVPELCRKLGITEIKTLACEGTGIFPRNPEPIEQNLRQTMAI LASESCEFGIIVDPDVDRLALVCEDGTLFGEEYTLIACADFYLKHHKGPVVNNLSSSHALFDIARKHEVECFSAKVGEAN VIEVMKEKEAVIGGEGNGGIILPELHYGRDALAGIALFIQAFAGWKSATGGTLSEFRKTFPDYFMSKKKVELTTLSKESL DRIFDTVAANHPDAECNRLDGLKLDFENGWVHLRPSNTEPIVRIYTEASTQAEADALAARFIEEIETAASANPAKN
Sequences:
>Translated_476_residues MSLMISVSGIRGVVGKSLTPENLTAFTMAFATWIRRRKQALNPGSLAKPIIVIGRDSRPTGAVITGLVSNALSLCGCDVI DVGMTTTPTVEIATAGEGADGGLIVTASHNPVEWNALKMLDEKGEFLTASDVGELLEIAEKKAFDFARWDGIGTVTANGS WDAAHIDKILKLSCLDLDLVKSMNFRVLIDAVEGAGSYIVPELCRKLGITEIKTLACEGTGIFPRNPEPIEQNLRQTMAI LASESCEFGIIVDPDVDRLALVCEDGTLFGEEYTLIACADFYLKHHKGPVVNNLSSSHALFDIARKHEVECFSAKVGEAN VIEVMKEKEAVIGGEGNGGIILPELHYGRDALAGIALFIQAFAGWKSATGGTLSEFRKTFPDYFMSKKKVELTTLSKESL DRIFDTVAANHPDAECNRLDGLKLDFENGWVHLRPSNTEPIVRIYTEASTQAEADALAARFIEEIETAASANPAKN >Mature_475_residues SLMISVSGIRGVVGKSLTPENLTAFTMAFATWIRRRKQALNPGSLAKPIIVIGRDSRPTGAVITGLVSNALSLCGCDVID VGMTTTPTVEIATAGEGADGGLIVTASHNPVEWNALKMLDEKGEFLTASDVGELLEIAEKKAFDFARWDGIGTVTANGSW DAAHIDKILKLSCLDLDLVKSMNFRVLIDAVEGAGSYIVPELCRKLGITEIKTLACEGTGIFPRNPEPIEQNLRQTMAIL ASESCEFGIIVDPDVDRLALVCEDGTLFGEEYTLIACADFYLKHHKGPVVNNLSSSHALFDIARKHEVECFSAKVGEANV IEVMKEKEAVIGGEGNGGIILPELHYGRDALAGIALFIQAFAGWKSATGGTLSEFRKTFPDYFMSKKKVELTTLSKESLD RIFDTVAANHPDAECNRLDGLKLDFENGWVHLRPSNTEPIVRIYTEASTQAEADALAARFIEEIETAASANPAKN
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1788361, Length=422, Percent_Identity=27.0142180094787, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI1789566, Length=462, Percent_Identity=25.974025974026, Blast_Score=93, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 51379; Mature: 51248
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLMISVSGIRGVVGKSLTPENLTAFTMAFATWIRRRKQALNPGSLAKPIIVIGRDSRPT CEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC GAVITGLVSNALSLCGCDVIDVGMTTTPTVEIATAGEGADGGLIVTASHNPVEWNALKML HHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHH DEKGEFLTASDVGELLEIAEKKAFDFARWDGIGTVTANGSWDAAHIDKILKLSCLDLDLV HCCCCEEEHHHHHHHHHHHHHHHCCHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCHHHH KSMNFRVLIDAVEGAGSYIVPELCRKLGITEIKTLACEGTGIFPRNPEPIEQNLRQTMAI HCCCEEEEEEEECCCCCCHHHHHHHHCCCCHHHHEEECCCCCCCCCCCHHHHHHHHHHHH LASESCEFGIIVDPDVDRLALVCEDGTLFGEEYTLIACADFYLKHHKGPVVNNLSSSHAL HHCCCCCEEEEECCCCCEEEEEECCCEEECCCEEEEEEHHHHHHHCCCCCCCCCCCCHHH FDIARKHEVECFSAKVGEANVIEVMKEKEAVIGGEGNGGIILPELHYGRDALAGIALFIQ HHHHHHCCCEEEECCCCCCHHHHHHHHHHHEECCCCCCCEEECCCCCCHHHHHHHHHHHH AFAGWKSATGGTLSEFRKTFPDYFMSKKKVELTTLSKESLDRIFDTVAANHPDAECNRLD HHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCHHCCC GLKLDFENGWVHLRPSNTEPIVRIYTEASTQAEADALAARFIEEIETAASANPAKN CCEEEECCCEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SLMISVSGIRGVVGKSLTPENLTAFTMAFATWIRRRKQALNPGSLAKPIIVIGRDSRPT EEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC GAVITGLVSNALSLCGCDVIDVGMTTTPTVEIATAGEGADGGLIVTASHNPVEWNALKML HHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHH DEKGEFLTASDVGELLEIAEKKAFDFARWDGIGTVTANGSWDAAHIDKILKLSCLDLDLV HCCCCEEEHHHHHHHHHHHHHHHCCHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCHHHH KSMNFRVLIDAVEGAGSYIVPELCRKLGITEIKTLACEGTGIFPRNPEPIEQNLRQTMAI HCCCEEEEEEEECCCCCCHHHHHHHHCCCCHHHHEEECCCCCCCCCCCHHHHHHHHHHHH LASESCEFGIIVDPDVDRLALVCEDGTLFGEEYTLIACADFYLKHHKGPVVNNLSSSHAL HHCCCCCEEEEECCCCCEEEEEECCCEEECCCEEEEEEHHHHHHHCCCCCCCCCCCCHHH FDIARKHEVECFSAKVGEANVIEVMKEKEAVIGGEGNGGIILPELHYGRDALAGIALFIQ HHHHHHCCCEEEECCCCCCHHHHHHHHHHHEECCCCCCCEEECCCCCCHHHHHHHHHHHH AFAGWKSATGGTLSEFRKTFPDYFMSKKKVELTTLSKESLDRIFDTVAANHPDAECNRLD HHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCHHCCC GLKLDFENGWVHLRPSNTEPIVRIYTEASTQAEADALAARFIEEIETAASANPAKN CCEEEECCCEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014 [H]