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The map label for this gene is lpsE [H]

Identifier: 21673066

GI number: 21673066

Start: 240843

End: 241850

Strand: Reverse

Name: lpsE [H]

Synonym: CT0226

Alternate gene names: 21673066

Gene position: 241850-240843 (Counterclockwise)

Preceding gene: 21673067

Following gene: 21673065

Centisome position: 11.22

GC content: 62.2

Gene sequence:

>1008_bases
ATGGCCGCCCGCAAGCTTTCGGAGCAGCATGAGGTCTCGCTCATCTATCGCAAGGAGGCGGTGGGCAAACACTTCGACCT
GCCGAAATTCCGCCTCCCTTGCCTCAGCCACATCGATCTCTACACGCTCTTCCGGATGGTGGCGATCATTCGCCAAAACG
GCATCGAGGTCGTCATCCCGACCAAGCGCAAGGACTACCTCCTCGGCGGTCTGGCCGGAAAAATGACCGGCGCGGCGATG
ATTCTACGCCTCGGCGCGGACCGCAAGCTGAAATGGCCTTGGCAGCGCTTCATGTACCACACCCTCAGCAACGGCATCAT
CGTCAACGCGAGCAAAATCAAAAAGACCCTGCTCGAAACCGGCTACATCCCCGAAGCGAAGATCCGCGTCATTTACAACG
GCCTCGACATCGCCGAACTCGACCGGCGGCGCTCGGAACAGACCGTCGCCAAGCCATTCCCGGTGACAATCACCGGCCTC
GGACGGCTCACCTGGAACAAGGGGTACGACTTCCTCATCCGCAGCTTCTCGCGCTTCGTCGAAGCGAGCGGCAACCGTGA
CGCCGGAATCGTGCTGATCGGCGACGGCGCGCAGAAAAAGGAGTTCGCGAAATTGGCTGACGAGCTGGGACTCGCGGATC
GCGTGCTCTTTCCGGGCTTCCAGCAAAATCCTTACTCGTGGCTCGCCGCGAGCGACATTTTTGCCGTCACCTCGACCAAC
GAGGGCTTGCCCAACGCCCTGCTCGAAGCGATGTACCTCGGCAACGCGCCGATCAGCACGCGGGCGGGCGGCGTTGAAGA
GGTGATCGACGACGGCCGGAACGGACTTCTGCTCGACTACGGCGACGAGGAGGCGCTGGCGAGTGCCCTGCAACTGCTCG
TCAAATCGCCGGAGCGCCGAGCGGAGTTCGCGCGGCAAGCGACGACGCGGATCGTCGAGCAATTTTCGATGGAGCGGATG
GCGAGCGAAATCGCCAGCTTCTGCCGGGAGGTGGCGGCGAAACGATGA

Upstream 100 bases:

>100_bases
CGTACTGCCAACCGACGCCATCGACGGCAGACTCTGAGGCATGAAGCTTCTCTTCGTCAACTCCGCGCGGGAGTGGGGCG
GCACAGAAAAATGGACGCGG

Downstream 100 bases:

>100_bases
GAGAAGCACGTACAGATTTCGATAAATTCCGCAAACCCGCGAACCGGTGAACTTCCTCTTCCTGAACTCCGCGAGTCGCG
GATGGGGTGGCAACGAAAAA

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MAARKLSEQHEVSLIYRKEAVGKHFDLPKFRLPCLSHIDLYTLFRMVAIIRQNGIEVVIPTKRKDYLLGGLAGKMTGAAM
ILRLGADRKLKWPWQRFMYHTLSNGIIVNASKIKKTLLETGYIPEAKIRVIYNGLDIAELDRRRSEQTVAKPFPVTITGL
GRLTWNKGYDFLIRSFSRFVEASGNRDAGIVLIGDGAQKKEFAKLADELGLADRVLFPGFQQNPYSWLAASDIFAVTSTN
EGLPNALLEAMYLGNAPISTRAGGVEEVIDDGRNGLLLDYGDEEALASALQLLVKSPERRAEFARQATTRIVEQFSMERM
ASEIASFCREVAAKR

Sequences:

>Translated_335_residues
MAARKLSEQHEVSLIYRKEAVGKHFDLPKFRLPCLSHIDLYTLFRMVAIIRQNGIEVVIPTKRKDYLLGGLAGKMTGAAM
ILRLGADRKLKWPWQRFMYHTLSNGIIVNASKIKKTLLETGYIPEAKIRVIYNGLDIAELDRRRSEQTVAKPFPVTITGL
GRLTWNKGYDFLIRSFSRFVEASGNRDAGIVLIGDGAQKKEFAKLADELGLADRVLFPGFQQNPYSWLAASDIFAVTSTN
EGLPNALLEAMYLGNAPISTRAGGVEEVIDDGRNGLLLDYGDEEALASALQLLVKSPERRAEFARQATTRIVEQFSMERM
ASEIASFCREVAAKR
>Mature_334_residues
AARKLSEQHEVSLIYRKEAVGKHFDLPKFRLPCLSHIDLYTLFRMVAIIRQNGIEVVIPTKRKDYLLGGLAGKMTGAAMI
LRLGADRKLKWPWQRFMYHTLSNGIIVNASKIKKTLLETGYIPEAKIRVIYNGLDIAELDRRRSEQTVAKPFPVTITGLG
RLTWNKGYDFLIRSFSRFVEASGNRDAGIVLIGDGAQKKEFAKLADELGLADRVLFPGFQQNPYSWLAASDIFAVTSTNE
GLPNALLEAMYLGNAPISTRAGGVEEVIDDGRNGLLLDYGDEEALASALQLLVKSPERRAEFARQATTRIVEQFSMERMA
SEIASFCREVAAKR

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 37443; Mature: 37312

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARKLSEQHEVSLIYRKEAVGKHFDLPKFRLPCLSHIDLYTLFRMVAIIRQNGIEVVIP
CCCCHHCCHHHHHEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEC
TKRKDYLLGGLAGKMTGAAMILRLGADRKLKWPWQRFMYHTLSNGIIVNASKIKKTLLET
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHC
GYIPEAKIRVIYNGLDIAELDRRRSEQTVAKPFPVTITGLGRLTWNKGYDFLIRSFSRFV
CCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCHHHHHHHHHHHH
EASGNRDAGIVLIGDGAQKKEFAKLADELGLADRVLFPGFQQNPYSWLAASDIFAVTSTN
HCCCCCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECCCEEEEECCC
EGLPNALLEAMYLGNAPISTRAGGVEEVIDDGRNGLLLDYGDEEALASALQLLVKSPERR
CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCHHH
AEFARQATTRIVEQFSMERMASEIASFCREVAAKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AARKLSEQHEVSLIYRKEAVGKHFDLPKFRLPCLSHIDLYTLFRMVAIIRQNGIEVVIP
CCCHHCCHHHHHEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEC
TKRKDYLLGGLAGKMTGAAMILRLGADRKLKWPWQRFMYHTLSNGIIVNASKIKKTLLET
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHC
GYIPEAKIRVIYNGLDIAELDRRRSEQTVAKPFPVTITGLGRLTWNKGYDFLIRSFSRFV
CCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCHHHHHHHHHHHH
EASGNRDAGIVLIGDGAQKKEFAKLADELGLADRVLFPGFQQNPYSWLAASDIFAVTSTN
HCCCCCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECCCEEEEECCC
EGLPNALLEAMYLGNAPISTRAGGVEEVIDDGRNGLLLDYGDEEALASALQLLVKSPERR
CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCHHH
AEFARQATTRIVEQFSMERMASEIASFCREVAAKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]