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The map label for this gene is lpsE [H]

Identifier: 21673064

GI number: 21673064

Start: 238605

End: 239717

Strand: Reverse

Name: lpsE [H]

Synonym: CT0224

Alternate gene names: 21673064

Gene position: 239717-238605 (Counterclockwise)

Preceding gene: 21673065

Following gene: 21673063

Centisome position: 11.12

GC content: 61.19

Gene sequence:

>1113_bases
GTGAACATACTCTTCATCAACTCCATTGGCCGCAACAAATTCGGCGGCGGCGAAAAGTGGATGGTCAACGCCGCCAAAGG
CTTGACCGATCGCGGCCATAACGTGGTGCTCGCCAGCAAGCGCAACTCCCGGCTGCTCGATTACGCCGCCGGGAGCGGCG
TCCGTACGGAGGTGATGGAGATTCGCGGCGACTTCAGCCCCTTGGCGACGCTGAAAATCGCCGCGTGGATGAAACGCCAC
CAGACCGACATCCTCATCTGCAACCTCAACAAGGATGTGCGCGTGGCGGGCCTCGCCGCGCGGCTCGTCGGGCGGCCCGT
GGTGCTGGCGCGACACGGCATGTTGCTGTGCAGCAAGAAATGGAAGCACAAACTCTCGCTCACGCGCCTGACCGACGGCA
TCGTCACCAACAGCCGCACCATCCGCGAAGCCTACGCCGGGTACGGCTGGTTCAGCGAAAATTTCGTCAAGGTGATCTAC
AACGGCCTCACTATTCCGGCAGAGGTCACGGCGTTCGACTTCGCCTCGCGCTACCCCGGCAAAAAGATCATCTACAGCGC
CGGACGTTTATCGAAACAGAAGGGGTTCGAGTACCTGATCGACGCCGCCGCCATGCTGAAGCGCAAGCGCGACGACCTCC
TCTTCGCCATTTCGGGCGAAGGCAAGCTCGAAATCGAGCTGAAAAACAGGGTCGCGGCGCTCGGCCTCAAAGGGTCGTTC
GTCTTCCTCGGCTTCACGCCCGACATTTACCCCTTCCTCAAAGGGTGCGACCTCTTCGTGCTGGCGTCGCTTTTCGAAGG
GATGCCGAACGTCGTCATGGAGGCGATGGCCATGCAGAAGCCGGTCATCGCCACCGACGTGAACGGCGCGCGCGAGCTGA
TGGGCGCGAGCCCGGAAAGCCTCGTCTGCGACACCGGTCTCATCATCCCGCCGAAAAATCCGGCAGCCATCGCCGAGGCC
ATCGAACAAATCATCGACAACCCCGCCCTCCTCGAAGCCTACGGCAAAGCCGGACACCAGCGCGTCGAAACGCACTTCAC
CGTGCCAATCATGATCGACAATCTCGAAAAACACCTGCAATCGAAGCTCGCTGAAAAAGCCGGGCGGTGCTGA

Upstream 100 bases:

>100_bases
CAAATGCACACCAAACGATAATGCAGCGATTCTCGATCGAGCTGATGCGCAAAGACCTGTTCGAATTCTGTTCAGAAATC
AATGATCGAAAAAAAGGCAC

Downstream 100 bases:

>100_bases
CCGGCGCGCCAGTCTGACCACGAGCGATGATGACGGAAAACATGATTACCCGTCATTCCCGACCGTAGGGGCGAACCTGT
GTGTTCGCCCTCTTGCGATG

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MNILFINSIGRNKFGGGEKWMVNAAKGLTDRGHNVVLASKRNSRLLDYAAGSGVRTEVMEIRGDFSPLATLKIAAWMKRH
QTDILICNLNKDVRVAGLAARLVGRPVVLARHGMLLCSKKWKHKLSLTRLTDGIVTNSRTIREAYAGYGWFSENFVKVIY
NGLTIPAEVTAFDFASRYPGKKIIYSAGRLSKQKGFEYLIDAAAMLKRKRDDLLFAISGEGKLEIELKNRVAALGLKGSF
VFLGFTPDIYPFLKGCDLFVLASLFEGMPNVVMEAMAMQKPVIATDVNGARELMGASPESLVCDTGLIIPPKNPAAIAEA
IEQIIDNPALLEAYGKAGHQRVETHFTVPIMIDNLEKHLQSKLAEKAGRC

Sequences:

>Translated_370_residues
MNILFINSIGRNKFGGGEKWMVNAAKGLTDRGHNVVLASKRNSRLLDYAAGSGVRTEVMEIRGDFSPLATLKIAAWMKRH
QTDILICNLNKDVRVAGLAARLVGRPVVLARHGMLLCSKKWKHKLSLTRLTDGIVTNSRTIREAYAGYGWFSENFVKVIY
NGLTIPAEVTAFDFASRYPGKKIIYSAGRLSKQKGFEYLIDAAAMLKRKRDDLLFAISGEGKLEIELKNRVAALGLKGSF
VFLGFTPDIYPFLKGCDLFVLASLFEGMPNVVMEAMAMQKPVIATDVNGARELMGASPESLVCDTGLIIPPKNPAAIAEA
IEQIIDNPALLEAYGKAGHQRVETHFTVPIMIDNLEKHLQSKLAEKAGRC
>Mature_370_residues
MNILFINSIGRNKFGGGEKWMVNAAKGLTDRGHNVVLASKRNSRLLDYAAGSGVRTEVMEIRGDFSPLATLKIAAWMKRH
QTDILICNLNKDVRVAGLAARLVGRPVVLARHGMLLCSKKWKHKLSLTRLTDGIVTNSRTIREAYAGYGWFSENFVKVIY
NGLTIPAEVTAFDFASRYPGKKIIYSAGRLSKQKGFEYLIDAAAMLKRKRDDLLFAISGEGKLEIELKNRVAALGLKGSF
VFLGFTPDIYPFLKGCDLFVLASLFEGMPNVVMEAMAMQKPVIATDVNGARELMGASPESLVCDTGLIIPPKNPAAIAEA
IEQIIDNPALLEAYGKAGHQRVETHFTVPIMIDNLEKHLQSKLAEKAGRC

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 40683; Mature: 40683

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILFINSIGRNKFGGGEKWMVNAAKGLTDRGHNVVLASKRNSRLLDYAAGSGVRTEVME
CEEEEEECCCCCCCCCCCEEEEEHHCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHH
IRGDFSPLATLKIAAWMKRHQTDILICNLNKDVRVAGLAARLVGRPVVLARHGMLLCSKK
HHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCEEEHHCCHHEECHH
WKHKLSLTRLTDGIVTNSRTIREAYAGYGWFSENFVKVIYNGLTIPAEVTAFDFASRYPG
HHHHHHHHHHHCCHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
KKIIYSAGRLSKQKGFEYLIDAAAMLKRKRDDLLFAISGEGKLEIELKNRVAALGLKGSF
CEEEEECCCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCEEEEECCCCE
VFLGFTPDIYPFLKGCDLFVLASLFEGMPNVVMEAMAMQKPVIATDVNGARELMGASPES
EEEECCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHCCCCCC
LVCDTGLIIPPKNPAAIAEAIEQIIDNPALLEAYGKAGHQRVETHFTVPIMIDNLEKHLQ
EEECCCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEHEEEEEEEEEHHHHHHHH
SKLAEKAGRC
HHHHHHHCCC
>Mature Secondary Structure
MNILFINSIGRNKFGGGEKWMVNAAKGLTDRGHNVVLASKRNSRLLDYAAGSGVRTEVME
CEEEEEECCCCCCCCCCCEEEEEHHCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHH
IRGDFSPLATLKIAAWMKRHQTDILICNLNKDVRVAGLAARLVGRPVVLARHGMLLCSKK
HHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCEEEHHCCHHEECHH
WKHKLSLTRLTDGIVTNSRTIREAYAGYGWFSENFVKVIYNGLTIPAEVTAFDFASRYPG
HHHHHHHHHHHCCHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
KKIIYSAGRLSKQKGFEYLIDAAAMLKRKRDDLLFAISGEGKLEIELKNRVAALGLKGSF
CEEEEECCCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCEEEEECCCCE
VFLGFTPDIYPFLKGCDLFVLASLFEGMPNVVMEAMAMQKPVIATDVNGARELMGASPES
EEEECCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHCCCCCC
LVCDTGLIIPPKNPAAIAEAIEQIIDNPALLEAYGKAGHQRVETHFTVPIMIDNLEKHLQ
EEECCCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEHEEEEEEEEEHHHHHHHH
SKLAEKAGRC
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]