| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673054
Identifier: 21673054
GI number: 21673054
Start: 228858
End: 229985
Strand: Reverse
Name: 21673054
Synonym: CT0213
Alternate gene names: NA
Gene position: 229985-228858 (Counterclockwise)
Preceding gene: 21673056
Following gene: 21673050
Centisome position: 10.67
GC content: 38.74
Gene sequence:
>1128_bases TTGATCGCCGTATCCATATCGCATGCACTGATAAACCATGTAGACGAAGTCTATGTGGTTGACCACGCCAGCACAGACCA AACCTTTCATGGTCTAAACCATCTTAAAAAACTCTGGGGAGAACGTCTTCACATTATAACGATAAACAATATCGGTTTTT TTCAAGAGGCAGCAACCAACACAATAATACAGATATCAAAAAAATCAAACCCTGACTGGATATATGTTTTTGATGCCGAC GAATTCTTATTAGTAGACGAATCAACTTCGTTAAGAAAAATACTGTCAAATACAGAAAAATGTCACCAGGCAATCAGATA CACAGTCAACAACTATATCTCAACAAGACATTTTAATGACCTCATACTCGATAACTACAAAAACATTATCCATAAATCCG TCCCCAATCCAGAGATAGAGAAAAAGGCAAACACGCGCCCATATAAAAGCCTCACAAAAAACAAAACGATCCCCGAATTG ATTTATGATGGAGATGCCACATTTTTTGACATACCATTTCCTTCAAAAGTAATCATAAGACTCAGTGATTTTTTACAAAT AACAGCAGGGGCACATTCAGCAATTCACTTCAAAGGCAACGTCCAAGGCAAACACATAAAAGAAATTGAAGCAGCCCACT TAACCTATCCAACAAAGAAACGCCTGCAAAACAAGGCAGAACATGGAGAATTCAAGATAAAAAACAAATTTCCCCCAAAC CATGGCTGGCAAAATCAACTTGTTTACAAGATAGCGCAAGAAGGGCGGTTAGACTGGTTCTGGGAGAAGCACTCCATGCC TGACAAGCCAACATCAAAAAGCTTGGGACCAGCGCACATCATTGACCGACGATTCAGCGAAATCATAACAAAAACGACAG ACTTTCTTGAAAAGGGTTTTCAATCCGGGGACCTCTCAATGATCGGGGAAAAAACAATCGAAAAAGATAGCGGAGACGAA ACGCAAATAAGTATCAGTGAGATGATTATGCTATCAGAAACCCTGCGAACACAAAACACTGCGCTCATTGATAATTTCTA TAAAACCTTACAAGAAAAACCGTTGTACAGATTACTAAAAACAGCAAAGCATGTCGAAAGAGAAATAAGAAAAAGAACAA GATTCTGA
Upstream 100 bases:
>100_bases GTAGTATCATGGTTAACGCTATAGCATATAGGCTTTTACATATTTCACAAAAAAAACAATGAAGATAGTTGGAATTGTTT TTGCCCATAATGAATGGGGA
Downstream 100 bases:
>100_bases AACTATTGGCAGACTTGAAACGCCCATCATTTACGACAACATAGAGAGTTAAGTAACTGCATTTTCACACGACACCACCT TTTGACCGTTGACTTCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MIAVSISHALINHVDEVYVVDHASTDQTFHGLNHLKKLWGERLHIITINNIGFFQEAATNTIIQISKKSNPDWIYVFDAD EFLLVDESTSLRKILSNTEKCHQAIRYTVNNYISTRHFNDLILDNYKNIIHKSVPNPEIEKKANTRPYKSLTKNKTIPEL IYDGDATFFDIPFPSKVIIRLSDFLQITAGAHSAIHFKGNVQGKHIKEIEAAHLTYPTKKRLQNKAEHGEFKIKNKFPPN HGWQNQLVYKIAQEGRLDWFWEKHSMPDKPTSKSLGPAHIIDRRFSEIITKTTDFLEKGFQSGDLSMIGEKTIEKDSGDE TQISISEMIMLSETLRTQNTALIDNFYKTLQEKPLYRLLKTAKHVEREIRKRTRF
Sequences:
>Translated_375_residues MIAVSISHALINHVDEVYVVDHASTDQTFHGLNHLKKLWGERLHIITINNIGFFQEAATNTIIQISKKSNPDWIYVFDAD EFLLVDESTSLRKILSNTEKCHQAIRYTVNNYISTRHFNDLILDNYKNIIHKSVPNPEIEKKANTRPYKSLTKNKTIPEL IYDGDATFFDIPFPSKVIIRLSDFLQITAGAHSAIHFKGNVQGKHIKEIEAAHLTYPTKKRLQNKAEHGEFKIKNKFPPN HGWQNQLVYKIAQEGRLDWFWEKHSMPDKPTSKSLGPAHIIDRRFSEIITKTTDFLEKGFQSGDLSMIGEKTIEKDSGDE TQISISEMIMLSETLRTQNTALIDNFYKTLQEKPLYRLLKTAKHVEREIRKRTRF >Mature_375_residues MIAVSISHALINHVDEVYVVDHASTDQTFHGLNHLKKLWGERLHIITINNIGFFQEAATNTIIQISKKSNPDWIYVFDAD EFLLVDESTSLRKILSNTEKCHQAIRYTVNNYISTRHFNDLILDNYKNIIHKSVPNPEIEKKANTRPYKSLTKNKTIPEL IYDGDATFFDIPFPSKVIIRLSDFLQITAGAHSAIHFKGNVQGKHIKEIEAAHLTYPTKKRLQNKAEHGEFKIKNKFPPN HGWQNQLVYKIAQEGRLDWFWEKHSMPDKPTSKSLGPAHIIDRRFSEIITKTTDFLEKGFQSGDLSMIGEKTIEKDSGDE TQISISEMIMLSETLRTQNTALIDNFYKTLQEKPLYRLLKTAKHVEREIRKRTRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43414; Mature: 43414
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAVSISHALINHVDEVYVVDHASTDQTFHGLNHLKKLWGERLHIITINNIGFFQEAATN CEEEEHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHCC TIIQISKKSNPDWIYVFDADEFLLVDESTSLRKILSNTEKCHQAIRYTVNNYISTRHFND EEEEEECCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILDNYKNIIHKSVPNPEIEKKANTRPYKSLTKNKTIPELIYDGDATFFDIPFPSKVIIR HHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHCCCCCCCEEECCCCCEEECCCCCHHHHH LSDFLQITAGAHSAIHFKGNVQGKHIKEIEAAHLTYPTKKRLQNKAEHGEFKIKNKFPPN HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCC HGWQNQLVYKIAQEGRLDWFWEKHSMPDKPTSKSLGPAHIIDRRFSEIITKTTDFLEKGF CCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC QSGDLSMIGEKTIEKDSGDETQISISEMIMLSETLRTQNTALIDNFYKTLQEKPLYRLLK CCCCCHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHH TAKHVEREIRKRTRF HHHHHHHHHHHHCCC >Mature Secondary Structure MIAVSISHALINHVDEVYVVDHASTDQTFHGLNHLKKLWGERLHIITINNIGFFQEAATN CEEEEHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHCC TIIQISKKSNPDWIYVFDADEFLLVDESTSLRKILSNTEKCHQAIRYTVNNYISTRHFND EEEEEECCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILDNYKNIIHKSVPNPEIEKKANTRPYKSLTKNKTIPELIYDGDATFFDIPFPSKVIIR HHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHCCCCCCCEEECCCCCEEECCCCCHHHHH LSDFLQITAGAHSAIHFKGNVQGKHIKEIEAAHLTYPTKKRLQNKAEHGEFKIKNKFPPN HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCC HGWQNQLVYKIAQEGRLDWFWEKHSMPDKPTSKSLGPAHIIDRRFSEIITKTTDFLEKGF CCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC QSGDLSMIGEKTIEKDSGDETQISISEMIMLSETLRTQNTALIDNFYKTLQEKPLYRLLK CCCCCHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHH TAKHVEREIRKRTRF HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA