| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673028
Identifier: 21673028
GI number: 21673028
Start: 196473
End: 197303
Strand: Reverse
Name: 21673028
Synonym: CT0187
Alternate gene names: NA
Gene position: 197303-196473 (Counterclockwise)
Preceding gene: 21673031
Following gene: 21673025
Centisome position: 9.16
GC content: 61.25
Gene sequence:
>831_bases ATGAAACTCACCATTCTTACCGACAACCGCGCCGCACCCGGACTCACCTGCGAACACGGCTTCGCGGTGCTGATTGAAAC CGGCGGCAAGCGCATCCTGTTCGACACCGGCCAGCTCACGGCGATCGATGCCAACTGCCGTGCGCTCGGCATCGACTTGT CGGACATCGACATCATCGTACTCAGCCACGGGCACTACGACCACACCGGCAACCTCGCCGACGTGCTCCGAATCGCCGAC CGCGCCACGCTCTACCTCCACCCGTCAGCGCTCATCGAACGCTACAGCATCCGCAACGACAAGCCCAAACCCATCGACAT GCCCGAAACCGCCAAGCAAGCAATTAACGGACTTCCGAAAGAGCGGGTCGTATGGGTCACTGAGCCGACCCGCCTGACCG ATGGCGCCTTCCTGACCGGCCCAGTCCCCCGCCAGACAACCTTCGAGGACACCGGCGGCCCATTTTTCTTTGATCCGGAC GGAAAAACGCCTGACCCCATCGAAGACGATCTGTCGCTCTGGATCGAGAAGCCGGAAGGGCTGATCGTGCTCGCAGGATG TTGCCATGCCGGCATCGTCAACACGCTTGACTACATCGAGAGCATCACCGGGCAAAAACGGATCGCGACGCTTATCGGCG GAATGCACCTCTCGGCAGCCAGCCCGGAGCGCCTCAACCGCACCGTAGCATCGCTCGCCAATCGAGACATCTCCCGCCTC ATTGCCTGCCACTGCACCGGTCAGGCAGCTGTAGAACGCTTCAGCAAAGAGCTGCCGTATCCAGTAGAGGCGGGTTATGC CGGCATGGTGGTGGAGTCGGCGAATGAGTAA
Upstream 100 bases:
>100_bases AAACTGCGCCTCCATCACAGAGTTGTTCTCTGAAAAGAACCTTAACTTGTCAGAAAACGGCTAAACGCCGCAAAACATTG CATCGACATTTGATTGCATC
Downstream 100 bases:
>100_bases GACCATTTGCCCAAGAAGTCCACCTGCCCAAGTTACGCTCCCCTCAATTCCTCTTTCGCCTCAGCGATGAGCCGGTCGAG GCAGGTGCTGCAGACGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKLTILTDNRAAPGLTCEHGFAVLIETGGKRILFDTGQLTAIDANCRALGIDLSDIDIIVLSHGHYDHTGNLADVLRIAD RATLYLHPSALIERYSIRNDKPKPIDMPETAKQAINGLPKERVVWVTEPTRLTDGAFLTGPVPRQTTFEDTGGPFFFDPD GKTPDPIEDDLSLWIEKPEGLIVLAGCCHAGIVNTLDYIESITGQKRIATLIGGMHLSAASPERLNRTVASLANRDISRL IACHCTGQAAVERFSKELPYPVEAGYAGMVVESANE
Sequences:
>Translated_276_residues MKLTILTDNRAAPGLTCEHGFAVLIETGGKRILFDTGQLTAIDANCRALGIDLSDIDIIVLSHGHYDHTGNLADVLRIAD RATLYLHPSALIERYSIRNDKPKPIDMPETAKQAINGLPKERVVWVTEPTRLTDGAFLTGPVPRQTTFEDTGGPFFFDPD GKTPDPIEDDLSLWIEKPEGLIVLAGCCHAGIVNTLDYIESITGQKRIATLIGGMHLSAASPERLNRTVASLANRDISRL IACHCTGQAAVERFSKELPYPVEAGYAGMVVESANE >Mature_276_residues MKLTILTDNRAAPGLTCEHGFAVLIETGGKRILFDTGQLTAIDANCRALGIDLSDIDIIVLSHGHYDHTGNLADVLRIAD RATLYLHPSALIERYSIRNDKPKPIDMPETAKQAINGLPKERVVWVTEPTRLTDGAFLTGPVPRQTTFEDTGGPFFFDPD GKTPDPIEDDLSLWIEKPEGLIVLAGCCHAGIVNTLDYIESITGQKRIATLIGGMHLSAASPERLNRTVASLANRDISRL IACHCTGQAAVERFSKELPYPVEAGYAGMVVESANE
Specific function: Catalyzes the condensation of 6-hydroxymethyl-7,8- dihydropterin pyrophosphate (DHPP) with 4-(beta-D-ribofuranosyl)- aminobenzene-5'-phosphate (beta-RFA-P) to form 7,8-dihydropterin- 6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate, a precursor
COG id: COG1237
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 29972; Mature: 29972
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTILTDNRAAPGLTCEHGFAVLIETGGKRILFDTGQLTAIDANCRALGIDLSDIDIIV CEEEEEECCCCCCCCEECCCCEEEEECCCCEEEEECCCEEEEECCCEEEECCCCCEEEEE LSHGHYDHTGNLADVLRIADRATLYLHPSALIERYSIRNDKPKPIDMPETAKQAINGLPK EECCCCCCCCCHHHHHHHHCCEEEEECHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC ERVVWVTEPTRLTDGAFLTGPVPRQTTFEDTGGPFFFDPDGKTPDPIEDDLSLWIEKPEG CCEEEEECCCEECCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHEEEECCCC LIVLAGCCHAGIVNTLDYIESITGQKRIATLIGGMHLSAASPERLNRTVASLANRDISRL EEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHH IACHCTGQAAVERFSKELPYPVEAGYAGMVVESANE EEEECCCHHHHHHHHHHCCCCCCCCCCEEEEECCCC >Mature Secondary Structure MKLTILTDNRAAPGLTCEHGFAVLIETGGKRILFDTGQLTAIDANCRALGIDLSDIDIIV CEEEEEECCCCCCCCEECCCCEEEEECCCCEEEEECCCEEEEECCCEEEECCCCCEEEEE LSHGHYDHTGNLADVLRIADRATLYLHPSALIERYSIRNDKPKPIDMPETAKQAINGLPK EECCCCCCCCCHHHHHHHHCCEEEEECHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC ERVVWVTEPTRLTDGAFLTGPVPRQTTFEDTGGPFFFDPDGKTPDPIEDDLSLWIEKPEG CCEEEEECCCEECCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHEEEECCCC LIVLAGCCHAGIVNTLDYIESITGQKRIATLIGGMHLSAASPERLNRTVASLANRDISRL EEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHH IACHCTGQAAVERFSKELPYPVEAGYAGMVVESANE EEEECCCHHHHHHHHHHCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]