Click here to switch to the map view.

The map label for this gene is 21673020

Identifier: 21673020

GI number: 21673020

Start: 188903

End: 189379

Strand: Direct

Name: 21673020

Synonym: CT0179

Alternate gene names: NA

Gene position: 188903-189379 (Clockwise)

Preceding gene: 21673019

Following gene: 21673021

Centisome position: 8.77

GC content: 57.23

Gene sequence:

>477_bases
ATGGACTTTGAATGCCAGTTCGTGTGTGAGCTGAAAGAGCTCGCGCCGGTTCCAGCCCTGCTTATTCGCACACAAACCAC
CATGAGCGAGCTCGGCTCTTTGTTTGAAGCCGGCTACCATGATATCCTGCAACTGCTTGCAGGCCAGGGCAAATCGCCGT
CGGGACCGCCTTTCGCGCGCTACTTCGGCATGAGTGCCGGGACGTTCGAGGTCGAATTCGGTTTTCCTGTCGAGGGAGGC
GTCGAAGGCAGTGGCCGGGTCGTCACCGGGTTGACTCCCTCGGGCAAAGCCGCGAGTAGCCTCTACATCGGCCCGTATGG
CGAAATCGAAGCGGTCTACGACGCGCTCATGAAGTGGGTTGACGATAATGGCTTTGACCTGAGTGGCGAGGCATATGAAA
TTTATCTCGACAATCCTGCCGAAACAGCGCCTGACCAGCTCAGAACGCGAGTCTCTCTGATGCTTCACGAAAGCTGA

Upstream 100 bases:

>100_bases
GTGGTAGGGGTCGTGGGTTCAAATCCCGCTACGCCGACAAGTTTTTCCCTCCTTCACTATCCGGAAGAGTTCCTTTCTCA
ACAAAAACCGGAAATTATGT

Downstream 100 bases:

>100_bases
CGGGAATTCTCTTTTCGTGGCGGCGATTATGAAAAGAAACTTTTCTCATTCAATCGCCGCGAGCCTCTCATGAACGTAAG
CAATCTGCACTGTATCGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MDFECQFVCELKELAPVPALLIRTQTTMSELGSLFEAGYHDILQLLAGQGKSPSGPPFARYFGMSAGTFEVEFGFPVEGG
VEGSGRVVTGLTPSGKAASSLYIGPYGEIEAVYDALMKWVDDNGFDLSGEAYEIYLDNPAETAPDQLRTRVSLMLHES

Sequences:

>Translated_158_residues
MDFECQFVCELKELAPVPALLIRTQTTMSELGSLFEAGYHDILQLLAGQGKSPSGPPFARYFGMSAGTFEVEFGFPVEGG
VEGSGRVVTGLTPSGKAASSLYIGPYGEIEAVYDALMKWVDDNGFDLSGEAYEIYLDNPAETAPDQLRTRVSLMLHES
>Mature_158_residues
MDFECQFVCELKELAPVPALLIRTQTTMSELGSLFEAGYHDILQLLAGQGKSPSGPPFARYFGMSAGTFEVEFGFPVEGG
VEGSGRVVTGLTPSGKAASSLYIGPYGEIEAVYDALMKWVDDNGFDLSGEAYEIYLDNPAETAPDQLRTRVSLMLHES

Specific function: Unknown

COG id: COG4978

COG function: function code KT; Transcriptional regulator, effector-binding domain/component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17084; Mature: 17084

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFECQFVCELKELAPVPALLIRTQTTMSELGSLFEAGYHDILQLLAGQGKSPSGPPFAR
CCCCHHHEEEHHHCCCCCCEEHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHH
YFGMSAGTFEVEFGFPVEGGVEGSGRVVTGLTPSGKAASSLYIGPYGEIEAVYDALMKWV
HHCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHH
DDNGFDLSGEAYEIYLDNPAETAPDQLRTRVSLMLHES
CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHEEECC
>Mature Secondary Structure
MDFECQFVCELKELAPVPALLIRTQTTMSELGSLFEAGYHDILQLLAGQGKSPSGPPFAR
CCCCHHHEEEHHHCCCCCCEEHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHH
YFGMSAGTFEVEFGFPVEGGVEGSGRVVTGLTPSGKAASSLYIGPYGEIEAVYDALMKWV
HHCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHH
DDNGFDLSGEAYEIYLDNPAETAPDQLRTRVSLMLHES
CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA