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The map label for this gene is dedA [H]

Identifier: 21673019

GI number: 21673019

Start: 188035

End: 188700

Strand: Direct

Name: dedA [H]

Synonym: CT0178

Alternate gene names: 21673019

Gene position: 188035-188700 (Clockwise)

Preceding gene: 21673015

Following gene: 21673020

Centisome position: 8.73

GC content: 52.85

Gene sequence:

>666_bases
ATGGAGCTTTTCTCGAAACTTGCCGATTTTATTCTGCACATTGACAGGCACCTTCAGCTTCTCGCTTCGGAGTATGGTCT
GTGGCTTTATGGAATCCTTTTTCTGATTGTATTCTGCGAAACCGGTCTGGTGGTTTTTCCGCTTTTGCCAGGTGACTCGC
TGCTCTTCGCCGCCGGATCGCTCGCCGCGATTCCGATGTCGCAGCTCAGCCCGCACTGGCTCTTCGTCATCTTCACGACT
GCGGCGCTTTTGGGCGATACGGTCAACTACTGGATCGGCAGAAGTCTTGGGCCGAAGGTGTTCCATTTTGAAAAGTCCGC
GTTTTTCAATCCGGAGCACCTGCAAAAGACGCGCGGCTTTTTCGAAAAATACGGAGGCAAGACCATCATCATCGCCCGTT
TTATTCCTATTGTCCGCACCTTTACGCCATTCGTGGCTGGCGTCGGGGCCTTGCCCTATCCGAGATTTATCATGTTCAGC
ATTGTCGGGGCGCTGCTCTGGGTGGGGGTCTTCAGCTATGGCGGGTACTTTTTCGGACAACTGCCGGTAATCAAGGCCAA
CCTGAAACTGATGATTGTGGGCATTATCGCCGTATCGCTGTTGATACCAGCCATCGAGTTCGTGAAGCATCATTTTCGGC
GCAAGGCCAGTCTGGATGCGGATTGA

Upstream 100 bases:

>100_bases
TATACCGGTATATTAATCGCTTGCCGCACGGATTTCGTCAACCAGATGAATTTCGCTGTAATGCGTTTATTGACAAATAC
TTACCATAGATTTTACTTCA

Downstream 100 bases:

>100_bases
GGAGTTTGCCGGTTAAAAAATAATTATGGTAATTTCCCGAAACTTCTTATAATCCAGTCCTTAATCGGCGTATAGCGCAG
CCTGGTAGCGCACTACCTTG

Product: DedA protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MELFSKLADFILHIDRHLQLLASEYGLWLYGILFLIVFCETGLVVFPLLPGDSLLFAAGSLAAIPMSQLSPHWLFVIFTT
AALLGDTVNYWIGRSLGPKVFHFEKSAFFNPEHLQKTRGFFEKYGGKTIIIARFIPIVRTFTPFVAGVGALPYPRFIMFS
IVGALLWVGVFSYGGYFFGQLPVIKANLKLMIVGIIAVSLLIPAIEFVKHHFRRKASLDAD

Sequences:

>Translated_221_residues
MELFSKLADFILHIDRHLQLLASEYGLWLYGILFLIVFCETGLVVFPLLPGDSLLFAAGSLAAIPMSQLSPHWLFVIFTT
AALLGDTVNYWIGRSLGPKVFHFEKSAFFNPEHLQKTRGFFEKYGGKTIIIARFIPIVRTFTPFVAGVGALPYPRFIMFS
IVGALLWVGVFSYGGYFFGQLPVIKANLKLMIVGIIAVSLLIPAIEFVKHHFRRKASLDAD
>Mature_221_residues
MELFSKLADFILHIDRHLQLLASEYGLWLYGILFLIVFCETGLVVFPLLPGDSLLFAAGSLAAIPMSQLSPHWLFVIFTT
AALLGDTVNYWIGRSLGPKVFHFEKSAFFNPEHLQKTRGFFEKYGGKTIIIARFIPIVRTFTPFVAGVGALPYPRFIMFS
IVGALLWVGVFSYGGYFFGQLPVIKANLKLMIVGIIAVSLLIPAIEFVKHHFRRKASLDAD

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=210, Percent_Identity=57.1428571428571, Blast_Score=246, Evalue=8e-67,
Organism=Escherichia coli, GI1789481, Length=183, Percent_Identity=34.9726775956284, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1789384, Length=157, Percent_Identity=35.031847133758, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24746; Mature: 24746

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELFSKLADFILHIDRHLQLLASEYGLWLYGILFLIVFCETGLVVFPLLPGDSLLFAAGS
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCC
LAAIPMSQLSPHWLFVIFTTAALLGDTVNYWIGRSLGPKVFHFEKSAFFNPEHLQKTRGF
HHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHCCCCHHHHHHHHHH
FEKYGGKTIIIARFIPIVRTFTPFVAGVGALPYPRFIMFSIVGALLWVGVFSYGGYFFGQ
HHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCC
LPVIKANLKLMIVGIIAVSLLIPAIEFVKHHFRRKASLDAD
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MELFSKLADFILHIDRHLQLLASEYGLWLYGILFLIVFCETGLVVFPLLPGDSLLFAAGS
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCC
LAAIPMSQLSPHWLFVIFTTAALLGDTVNYWIGRSLGPKVFHFEKSAFFNPEHLQKTRGF
HHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHCCCCHHHHHHHHHH
FEKYGGKTIIIARFIPIVRTFTPFVAGVGALPYPRFIMFSIVGALLWVGVFSYGGYFFGQ
HHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCC
LPVIKANLKLMIVGIIAVSLLIPAIEFVKHHFRRKASLDAD
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]