| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is yeaZ [H]
Identifier: 21672980
GI number: 21672980
Start: 133234
End: 133908
Strand: Direct
Name: yeaZ [H]
Synonym: CT0139
Alternate gene names: 21672980
Gene position: 133234-133908 (Clockwise)
Preceding gene: 21672979
Following gene: 21672981
Centisome position: 6.18
GC content: 61.48
Gene sequence:
>675_bases ATGAAGATTCTTGCCATTGAGTGTACTCACGGTTTCGCCAGCGCGGCGGCCAGCAACGGCGAGCGTATGGTCGAGCGCCG TCTTGCGGAGTGGCAGAAAACCGCCGAATCGCTGGTGCCGCTCGTCATGCAGGTTATGGACGAGGCGGGCTTGACGGCGG CTGAACTCGATGGCGTTGCAGTTTCATCCGGCCCCGGCTCCTTCACCGCGCTGCGCATCGGCCTCTCCGTGGCCAAGGGC ATCGCCTTCGGTGCAGATTTGCCACTGGTGCCGGTGCCGACTTTGCTCGCCATGGCGGATGCCGCCGCGAAACACACCGC GACAAAGTATATTGTGCCAGTGATTCCGTCGAGGGCGGGCGAGTATTTCTATTCAATGTTCGCGCTGAAGGACGGGGCGC TTTCAGAGATCGAAAGTTCGCGTTGCCTCGTTTCCGAACTGCCCGAGCGGATTGCCGTCTTGACCGGCAGCCTCGTCATG GTCAGCCGCCCGGTTGACCTCCTTGCTGAACAGGCCCCTTCGCTCGCGCCATATCTTTTCGACGCATCCTTTTTCAGCGC GGCAACCCTTCTCTCCCATGCTTGTAAATCGCTTGCGGAAGGTGCCGCGGGAACGGCCACCGGAACGCTTCCCGATTACC GGCAGGCGTTTGTTCCTGCGCAGCGGCAGGGCTAA
Upstream 100 bases:
>100_bases GAACGGTTCGCTTCGCTCGACAGGCGCTACACCAGACGCGTGCAGTTGTTCATCGCCGGGGAGAGTCAGCGGAAAATTGT CATAACCTGAACGCGGCCTC
Downstream 100 bases:
>100_bases GCCGACGCGCTACCACCCGTTTTTGCCATGCCGGAACAGGTCGTTGCTGGCGGGTTACTGTTTTGTTTTATGGTTAGTTC AATAGCGCATTATTGCTATA
Product: protease, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MKILAIECTHGFASAAASNGERMVERRLAEWQKTAESLVPLVMQVMDEAGLTAAELDGVAVSSGPGSFTALRIGLSVAKG IAFGADLPLVPVPTLLAMADAAAKHTATKYIVPVIPSRAGEYFYSMFALKDGALSEIESSRCLVSELPERIAVLTGSLVM VSRPVDLLAEQAPSLAPYLFDASFFSAATLLSHACKSLAEGAAGTATGTLPDYRQAFVPAQRQG
Sequences:
>Translated_224_residues MKILAIECTHGFASAAASNGERMVERRLAEWQKTAESLVPLVMQVMDEAGLTAAELDGVAVSSGPGSFTALRIGLSVAKG IAFGADLPLVPVPTLLAMADAAAKHTATKYIVPVIPSRAGEYFYSMFALKDGALSEIESSRCLVSELPERIAVLTGSLVM VSRPVDLLAEQAPSLAPYLFDASFFSAATLLSHACKSLAEGAAGTATGTLPDYRQAFVPAQRQG >Mature_224_residues MKILAIECTHGFASAAASNGERMVERRLAEWQKTAESLVPLVMQVMDEAGLTAAELDGVAVSSGPGSFTALRIGLSVAKG IAFGADLPLVPVPTLLAMADAAAKHTATKYIVPVIPSRAGEYFYSMFALKDGALSEIESSRCLVSELPERIAVLTGSLVM VSRPVDLLAEQAPSLAPYLFDASFFSAATLLSHACKSLAEGAAGTATGTLPDYRQAFVPAQRQG
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=206, Percent_Identity=27.1844660194175, Blast_Score=89, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 23418; Mature: 23418
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILAIECTHGFASAAASNGERMVERRLAEWQKTAESLVPLVMQVMDEAGLTAAELDGVA CEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEE VSSGPGSFTALRIGLSVAKGIAFGADLPLVPVPTLLAMADAAAKHTATKYIVPVIPSRAG EECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCHHH EYFYSMFALKDGALSEIESSRCLVSELPERIAVLTGSLVMVSRPVDLLAEQAPSLAPYLF HHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCHHEEECCHHHHHHCCCCCCHHHH DASFFSAATLLSHACKSLAEGAAGTATGTLPDYRQAFVPAQRQG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MKILAIECTHGFASAAASNGERMVERRLAEWQKTAESLVPLVMQVMDEAGLTAAELDGVA CEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEE VSSGPGSFTALRIGLSVAKGIAFGADLPLVPVPTLLAMADAAAKHTATKYIVPVIPSRAG EECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCHHH EYFYSMFALKDGALSEIESSRCLVSELPERIAVLTGSLVMVSRPVDLLAEQAPSLAPYLF HHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCHHEEECCHHHHHHCCCCCCHHHH DASFFSAATLLSHACKSLAEGAAGTATGTLPDYRQAFVPAQRQG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]