Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21672917

Identifier: 21672917

GI number: 21672917

Start: 73469

End: 73735

Strand: Direct

Name: 21672917

Synonym: CT0076

Alternate gene names: NA

Gene position: 73469-73735 (Clockwise)

Preceding gene: 21672916

Following gene: 21672918

Centisome position: 3.41

GC content: 52.06

Gene sequence:

>267_bases
ATGGACACCGAACTGCTCGGTTATGCGGCAGGCATCCTGACCACCATCGCATTTATTCCCCAGGCGATCCAGATGATCCG
GACACGACAGGCGCGTGACATCAGCATGACCTGGGCCGTAACCATGACCGCCGGCGTTTTTCTGTGGCTTTGCTACGGCA
TCATGAAGCAAAGCTTTCCGATGATTTCAGCCAACAGCATCACCCTGCTTTTGCTCTTCATCATCCTTTTTTTCAAAATC
CGGGATCAAGGCAATTCCAACTCCTGA

Upstream 100 bases:

>100_bases
CCACCGATCCTCCGATTCACTCCCGCCGGTGATCCGATATTTTCTTATCTTTGCCTGTAGATCGTCGAGCGAGGAATCAT
CACAACGACTGGAATTACCC

Downstream 100 bases:

>100_bases
ATATCATCTTTCCATCATTATGGCACGACTTTCCATAGGGTTTATCGGCACCGGACGCATTGCCCAGGCGCTTATTTCCG
GACTTTCACACGACCCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MDTELLGYAAGILTTIAFIPQAIQMIRTRQARDISMTWAVTMTAGVFLWLCYGIMKQSFPMISANSITLLLLFIILFFKI
RDQGNSNS

Sequences:

>Translated_88_residues
MDTELLGYAAGILTTIAFIPQAIQMIRTRQARDISMTWAVTMTAGVFLWLCYGIMKQSFPMISANSITLLLLFIILFFKI
RDQGNSNS
>Mature_88_residues
MDTELLGYAAGILTTIAFIPQAIQMIRTRQARDISMTWAVTMTAGVFLWLCYGIMKQSFPMISANSITLLLLFIILFFKI
RDQGNSNS

Specific function: Unknown

COG id: COG4095

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9896; Mature: 9896

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTELLGYAAGILTTIAFIPQAIQMIRTRQARDISMTWAVTMTAGVFLWLCYGIMKQSFP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
MISANSITLLLLFIILFFKIRDQGNSNS
CCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDTELLGYAAGILTTIAFIPQAIQMIRTRQARDISMTWAVTMTAGVFLWLCYGIMKQSFP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
MISANSITLLLLFIILFFKIRDQGNSNS
CCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]