| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21672902
Identifier: 21672902
GI number: 21672902
Start: 61355
End: 62311
Strand: Reverse
Name: 21672902
Synonym: CT0061
Alternate gene names: NA
Gene position: 62311-61355 (Counterclockwise)
Preceding gene: 21672903
Following gene: 21672900
Centisome position: 2.89
GC content: 63.01
Gene sequence:
>957_bases GTGAGCGCAAGGTGTAAATCGAAACTTGCAGCGTTGCTTATGGCCGCCGGCCTCGGCACGGCGATACCTCCAGCCTCCGT GAGTGCCACGCTCCGTCCCGCCGACGTGAGGGTGAGCGCCGAGCCAGACAGCCTCTTTGCCGGGGAACGGCTGCGCTACG TCATTACCGTGCAGCACGACCACCGTGACTCGATCTCCGTGGTCTCGCTCAAAGCCGGCCAGGGCACGCCGTTCGAGATC ACCGGCACCAAATCTTTCTCGAAAAACCTGCCGGATGGCCGCGCCGAATTCCGGATGGATACCGAACTCGCTGTTTTCGG CTCGGGCCGTAAGCCGCTGCCGGGGTTTACGGTCGTCTCGAAACACGCTTCGGCGGCGGAACCGGAACGTCTCGTCATCA CCCCCTCCGAATCGGTGACAGTGCTGAGCATGACCGACTCAACCGTCACGGAGCTGCGCCCTATCGCGCCGCCGGTCAGC GCGCCGTTTCCGACGTGGCTGCTTGTGCCAGTGCTGCTCTCGCTGGCGGCGCTGGGGCTTGCCGGATACTTTGTCAAGTT GCTCATCACCGCTTTGCGCCGTCATCTCGCCGACCCGGGGCGAGCCGCGCGCAACAGACTCCGCGCGATCCACCGTCAAC TCTCCAAGGGCTTGCAGCCCGCCGCTGGATACGAATCACTCAGCAACATCCTGCGGGAATTTCTCCAAAAGCGCTACCAG TTCGGCGCGCTGGAAATGGTTACCCAGGAGATCGCAGATGAACTTGCCGCCCGAAGGATCAGCATCCGCCAGGAGTTGAT CAAGCTGCTCGACGAGGCCGATCTGGTCAAATTCGCTGACCGCCGCCCCGACATCGAAGAGTGCCGCCGCTCCCTCCGCA TCGCCGAAGTGCTCGTCGCCACCGCCGCTGAAGCGGAGACGACAGAAAAAGAACCGTTGATGGAACAGAGCGAGTAG
Upstream 100 bases:
>100_bases GAGGCGGTGCAGCGGCAACTGAGCCGCATGAAGGTCGATGCGGTCTTTCTCGATACCGGCAAGTCGATCATCGGCGGCCT GAACGCATTCTTCCGGCACC
Downstream 100 bases:
>100_bases TTGCCGTTTTGGTATCTGATGGGCAAAATGTGCGCCTCGTCAATCCTTGACACACCGCACGGCAAAGCCGTTCCTGGGGA CAACTTCTCCGACGCGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSARCKSKLAALLMAAGLGTAIPPASVSATLRPADVRVSAEPDSLFAGERLRYVITVQHDHRDSISVVSLKAGQGTPFEI TGTKSFSKNLPDGRAEFRMDTELAVFGSGRKPLPGFTVVSKHASAAEPERLVITPSESVTVLSMTDSTVTELRPIAPPVS APFPTWLLVPVLLSLAALGLAGYFVKLLITALRRHLADPGRAARNRLRAIHRQLSKGLQPAAGYESLSNILREFLQKRYQ FGALEMVTQEIADELAARRISIRQELIKLLDEADLVKFADRRPDIEECRRSLRIAEVLVATAAEAETTEKEPLMEQSE
Sequences:
>Translated_318_residues MSARCKSKLAALLMAAGLGTAIPPASVSATLRPADVRVSAEPDSLFAGERLRYVITVQHDHRDSISVVSLKAGQGTPFEI TGTKSFSKNLPDGRAEFRMDTELAVFGSGRKPLPGFTVVSKHASAAEPERLVITPSESVTVLSMTDSTVTELRPIAPPVS APFPTWLLVPVLLSLAALGLAGYFVKLLITALRRHLADPGRAARNRLRAIHRQLSKGLQPAAGYESLSNILREFLQKRYQ FGALEMVTQEIADELAARRISIRQELIKLLDEADLVKFADRRPDIEECRRSLRIAEVLVATAAEAETTEKEPLMEQSE >Mature_317_residues SARCKSKLAALLMAAGLGTAIPPASVSATLRPADVRVSAEPDSLFAGERLRYVITVQHDHRDSISVVSLKAGQGTPFEIT GTKSFSKNLPDGRAEFRMDTELAVFGSGRKPLPGFTVVSKHASAAEPERLVITPSESVTVLSMTDSTVTELRPIAPPVSA PFPTWLLVPVLLSLAALGLAGYFVKLLITALRRHLADPGRAARNRLRAIHRQLSKGLQPAAGYESLSNILREFLQKRYQF GALEMVTQEIADELAARRISIRQELIKLLDEADLVKFADRRPDIEECRRSLRIAEVLVATAAEAETTEKEPLMEQSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34702; Mature: 34571
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARCKSKLAALLMAAGLGTAIPPASVSATLRPADVRVSAEPDSLFAGERLRYVITVQHD CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCEEEEECCCCHHHCCCCEEEEEEEECC HRDSISVVSLKAGQGTPFEITGTKSFSKNLPDGRAEFRMDTELAVFGSGRKPLPGFTVVS CCCCEEEEEEECCCCCCEEEECCCHHHCCCCCCCHHEEECCEEEEECCCCCCCCCCHHHH KHASAAEPERLVITPSESVTVLSMTDSTVTELRPIAPPVSAPFPTWLLVPVLLSLAALGL CCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH AGYFVKLLITALRRHLADPGRAARNRLRAIHRQLSKGLQPAAGYESLSNILREFLQKRYQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH FGALEMVTQEIADELAARRISIRQELIKLLDEADLVKFADRRPDIEECRRSLRIAEVLVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH TAAEAETTEKEPLMEQSE HHHHHHCCCCCCCCCCCC >Mature Secondary Structure SARCKSKLAALLMAAGLGTAIPPASVSATLRPADVRVSAEPDSLFAGERLRYVITVQHD CCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCEEEEECCCCHHHCCCCEEEEEEEECC HRDSISVVSLKAGQGTPFEITGTKSFSKNLPDGRAEFRMDTELAVFGSGRKPLPGFTVVS CCCCEEEEEEECCCCCCEEEECCCHHHCCCCCCCHHEEECCEEEEECCCCCCCCCCHHHH KHASAAEPERLVITPSESVTVLSMTDSTVTELRPIAPPVSAPFPTWLLVPVLLSLAALGL CCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH AGYFVKLLITALRRHLADPGRAARNRLRAIHRQLSKGLQPAAGYESLSNILREFLQKRYQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH FGALEMVTQEIADELAARRISIRQELIKLLDEADLVKFADRRPDIEECRRSLRIAEVLVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH TAAEAETTEKEPLMEQSE HHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA