| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21672900
Identifier: 21672900
GI number: 21672900
Start: 59924
End: 60658
Strand: Reverse
Name: 21672900
Synonym: CT0059
Alternate gene names: NA
Gene position: 60658-59924 (Counterclockwise)
Preceding gene: 21672902
Following gene: 21672899
Centisome position: 2.81
GC content: 52.11
Gene sequence:
>735_bases GTGGCATATGCGTCGTTTGATCATCGTCAGGTTCCATTGTTTGAATACGTTCTCCGGATTTTGCCTGTTGGAGCATGGCG AAGGGGGAGAACAAATGTTAACGAAGTTTATCGAAGACAATGTAGTAATCGCACCGCCTTTATGCTACCCCGGGTGGACG AAGTTGCCGCAGTCGGCGCTCTTTTTATATTACATGTGCTGCATGAAGCTATTATCATCCACCTATCAGGAAAAATCATG AGCCGGCAGGTATTCAGCAAAACCGCCAAAGGTCTGTACCTCATTTCCCTTGCAAGTATCCTCGGGGCCTGCAACCATAA GGCGCCTGAACAGCAAAACACTGCGCCCAAGCCGGTTTCCGCGGCTGCCGATAATGCCACAGCCGTCACGATCGAATCTG GCAAAGGCTCGGTCGAGATTACCGATGCGGTAAAGCCTTGGCCGGATGATGCGCCCGCCGATGTGCCAAGATATCCATAC GGCACAATCAGAAAGATCATCAGAACCGAAACACCTGAAGGAAACAGCTGGGACATGGCCATCGAGCGGTTGCCGGAACA TGCTCTTCTGGATTACGAAGCGGTGCTCAAGGCAAAAGGGTTTGAAACCACCTCGATGATCGTTCCGGAAAAGGAGGGTG ACCGGGGAAGCGTGACCGGAATCAAAGGGGCGATCACGGTGGTGCTTATCGGTTCGGGTGGCAGCATGAGCCTGTCTATC ATCCAGAAACAATAG
Upstream 100 bases:
>100_bases AGGTATTGCCGTCAATGTCGGTGACCCGCTTCGGGGTGTTTCCGTTGCAGGCAGCCATGAACAGGGTAGCGAGCAGAAGA GGGATCATTGCGCCAAACAT
Downstream 100 bases:
>100_bases TTCAGCATTCATAAATCGACAACACCATGACACGTTACGATCCAGACTGCATTTTCTGCAAGATTGCCACCGGGCACATT CCGGCCAATCTGGTTTACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MAYASFDHRQVPLFEYVLRILPVGAWRRGRTNVNEVYRRQCSNRTAFMLPRVDEVAAVGALFILHVLHEAIIIHLSGKIM SRQVFSKTAKGLYLISLASILGACNHKAPEQQNTAPKPVSAAADNATAVTIESGKGSVEITDAVKPWPDDAPADVPRYPY GTIRKIIRTETPEGNSWDMAIERLPEHALLDYEAVLKAKGFETTSMIVPEKEGDRGSVTGIKGAITVVLIGSGGSMSLSI IQKQ
Sequences:
>Translated_244_residues MAYASFDHRQVPLFEYVLRILPVGAWRRGRTNVNEVYRRQCSNRTAFMLPRVDEVAAVGALFILHVLHEAIIIHLSGKIM SRQVFSKTAKGLYLISLASILGACNHKAPEQQNTAPKPVSAAADNATAVTIESGKGSVEITDAVKPWPDDAPADVPRYPY GTIRKIIRTETPEGNSWDMAIERLPEHALLDYEAVLKAKGFETTSMIVPEKEGDRGSVTGIKGAITVVLIGSGGSMSLSI IQKQ >Mature_243_residues AYASFDHRQVPLFEYVLRILPVGAWRRGRTNVNEVYRRQCSNRTAFMLPRVDEVAAVGALFILHVLHEAIIIHLSGKIMS RQVFSKTAKGLYLISLASILGACNHKAPEQQNTAPKPVSAAADNATAVTIESGKGSVEITDAVKPWPDDAPADVPRYPYG TIRKIIRTETPEGNSWDMAIERLPEHALLDYEAVLKAKGFETTSMIVPEKEGDRGSVTGIKGAITVVLIGSGGSMSLSII QKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26624; Mature: 26493
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYASFDHRQVPLFEYVLRILPVGAWRRGRTNVNEVYRRQCSNRTAFMLPRVDEVAAVGA CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHH LFILHVLHEAIIIHLSGKIMSRQVFSKTAKGLYLISLASILGACNHKAPEQQNTAPKPVS HHHHHHHHHHHEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC AAADNATAVTIESGKGSVEITDAVKPWPDDAPADVPRYPYGTIRKIIRTETPEGNSWDMA CCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHH IERLPEHALLDYEAVLKAKGFETTSMIVPEKEGDRGSVTGIKGAITVVLIGSGGSMSLSI HHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECEEEEEEEEECCCCEEEEE IQKQ EECC >Mature Secondary Structure AYASFDHRQVPLFEYVLRILPVGAWRRGRTNVNEVYRRQCSNRTAFMLPRVDEVAAVGA CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHH LFILHVLHEAIIIHLSGKIMSRQVFSKTAKGLYLISLASILGACNHKAPEQQNTAPKPVS HHHHHHHHHHHEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC AAADNATAVTIESGKGSVEITDAVKPWPDDAPADVPRYPYGTIRKIIRTETPEGNSWDMA CCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHH IERLPEHALLDYEAVLKAKGFETTSMIVPEKEGDRGSVTGIKGAITVVLIGSGGSMSLSI HHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECEEEEEEEEECCCCEEEEE IQKQ EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA