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The map label for this gene is 15924988

Identifier: 15924988

GI number: 15924988

Start: 2122626

End: 2123354

Strand: Direct

Name: 15924988

Synonym: SAV1998

Alternate gene names: NA

Gene position: 2122626-2123354 (Clockwise)

Preceding gene: 15924985

Following gene: 15924989

Centisome position: 73.74

GC content: 33.88

Gene sequence:

>729_bases
GTGTTCAGAAATATGAACAGTTTTAAGGATAGATTAAAGCAAATTATGTCTGAACGGAAGATATCTCAATCAGAGCTATC
AAGAAGGACTGGTATTGGCAGAAACTCAATTAGCGATTATTTAAATGGAAAATATGAAGCGAAACAAGACAAAGTCTTTG
AACTAGCAAAGGCTTTAAACGTTAACGAAGCGTGGCTTATGGGTTTTGATATTTCTAAGAATAGAAAAATTGAAAATAAC
GACATCGCTTCCATATACAGTAAACTCACGCCTCCAAGACAAAAAAATGTGCTTAACTATGCAAACGAGCAATTAGATGA
ACAGAATACTAAAGGCGATAATATTGTCGATATTAATTCATATAAACAGGATAGAATTGCAGTTAACGTCAATGGTTGTG
TCTCTGCTGGTGTAGGAGAACGTCTACACGGTGAAACATTGTTTACCGAAATGGTTAAAGCACCTATCCCACCACATGAT
TTAGCATTAAAAGTAAACGGTGATTCTATGGAACCTATGTTTAAAGACGGTGAAATTATATTCGTAGAGAAAACTCATAA
TATAAAAAATGGCCAAATTGGTATATTCATTATTGAAGAAGAAGCTTACGTTAAGAAAGTTTTTGTTGAAGATGATAGAT
TGACTCTAGTCTCACTGAACAAAGAATACCGCGACCTTCACTTTTATAGAAATGAAAGTGTGAGGTTAGTAGGGAAAGTA
ATTTTATAG

Upstream 100 bases:

>100_bases
TTTGTTTAAATAAGTCAACACATAAAATACATTTTTCTGTACAACATTTGTTAAAAATTATTGATAATCGTCATTGTACG
TAGTATTATATTCTTAGGAG

Downstream 100 bases:

>100_bases
GAGATAGTAAAATGAAACCTAGAAAGCAAGATGAAAAAATATTATCAGATCAATACAGTTACTTTGAACCAATAATCAGC
GACAGTTGTGACATAAAATT

Product: repressor-like protein

Products: NA

Alternate protein names: Transcriptional Regulator; Phage Repressor; Phage Repressor-Like Protein; Repressor; CI Repressor; Prophage; Transcriptional Repressor; Transcriptional Regulator Cro/CI Family; Bifunctional; Repressor-Like Protein; Transcription Regulator; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; LexA Repressor; CI-Like Repressor; Prophage Repressor; Cro/CI Family Transcriptional Regulator

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MFRNMNSFKDRLKQIMSERKISQSELSRRTGIGRNSISDYLNGKYEAKQDKVFELAKALNVNEAWLMGFDISKNRKIENN
DIASIYSKLTPPRQKNVLNYANEQLDEQNTKGDNIVDINSYKQDRIAVNVNGCVSAGVGERLHGETLFTEMVKAPIPPHD
LALKVNGDSMEPMFKDGEIIFVEKTHNIKNGQIGIFIIEEEAYVKKVFVEDDRLTLVSLNKEYRDLHFYRNESVRLVGKV
IL

Sequences:

>Translated_242_residues
MFRNMNSFKDRLKQIMSERKISQSELSRRTGIGRNSISDYLNGKYEAKQDKVFELAKALNVNEAWLMGFDISKNRKIENN
DIASIYSKLTPPRQKNVLNYANEQLDEQNTKGDNIVDINSYKQDRIAVNVNGCVSAGVGERLHGETLFTEMVKAPIPPHD
LALKVNGDSMEPMFKDGEIIFVEKTHNIKNGQIGIFIIEEEAYVKKVFVEDDRLTLVSLNKEYRDLHFYRNESVRLVGKV
IL
>Mature_242_residues
MFRNMNSFKDRLKQIMSERKISQSELSRRTGIGRNSISDYLNGKYEAKQDKVFELAKALNVNEAWLMGFDISKNRKIENN
DIASIYSKLTPPRQKNVLNYANEQLDEQNTKGDNIVDINSYKQDRIAVNVNGCVSAGVGERLHGETLFTEMVKAPIPPHD
LALKVNGDSMEPMFKDGEIIFVEKTHNIKNGQIGIFIIEEEAYVKKVFVEDDRLTLVSLNKEYRDLHFYRNESVRLVGKV
IL

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27777; Mature: 27777

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS00018 EF_HAND_1 ; PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRNMNSFKDRLKQIMSERKISQSELSRRTGIGRNSISDYLNGKYEAKQDKVFELAKALN
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCC
VNEAWLMGFDISKNRKIENNDIASIYSKLTPPRQKNVLNYANEQLDEQNTKGDNIVDINS
CCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECC
YKQDRIAVNVNGCVSAGVGERLHGETLFTEMVKAPIPPHDLALKVNGDSMEPMFKDGEII
CCCCEEEEEECCEEECCCCCHHCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEE
FVEKTHNIKNGQIGIFIIEEEAYVKKVFVEDDRLTLVSLNKEYRDLHFYRNESVRLVGKV
EEEECCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEECCCHHHHHHEECCCCEEEEEEE
IL
CC
>Mature Secondary Structure
MFRNMNSFKDRLKQIMSERKISQSELSRRTGIGRNSISDYLNGKYEAKQDKVFELAKALN
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCC
VNEAWLMGFDISKNRKIENNDIASIYSKLTPPRQKNVLNYANEQLDEQNTKGDNIVDINS
CCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECC
YKQDRIAVNVNGCVSAGVGERLHGETLFTEMVKAPIPPHDLALKVNGDSMEPMFKDGEII
CCCCEEEEEECCEEECCCCCHHCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEE
FVEKTHNIKNGQIGIFIIEEEAYVKKVFVEDDRLTLVSLNKEYRDLHFYRNESVRLVGKV
EEEECCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEECCCHHHHHHEECCCCEEEEEEE
IL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA