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The map label for this gene is glpP [H]

Identifier: 15924288

GI number: 15924288

Start: 1372012

End: 1372545

Strand: Direct

Name: glpP [H]

Synonym: SAV1298

Alternate gene names: 15924288

Gene position: 1372012-1372545 (Clockwise)

Preceding gene: 15924287

Following gene: 15924290

Centisome position: 47.66

GC content: 29.21

Gene sequence:

>534_bases
GTGAATAACAACATATTGCCTGCTATAAGAAACATTAAAGATTTAGAGAAACTGATTAAAACAGATTATAAAATGTGTGT
GCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATA
TAGATTTGATAAAAGGTTTAAGCCACGATGAATTTGCAAGTGAATTTATTATTCAGCAATACAAGCCAAAAGGTATCGTA
TCGACTAAATCTAAAGTAATAAAAAAAGCTAAATCATTAAATACTTTAACGATTTTTAGAGTATTTATTATTGATAGTCA
AGCATTGAAACGCAGTATAGATTTGATAAAAAAAGTGGAACCTGATTTTGTTGAAGTACTTCCAGGTGTTGCGAGTAAAG
CGATTCATCATATTCAGAAAGAAACAAACACACAAGTCATTGCAGGTGGCCTAATTAATACAATAGATGAAGTCAATGAA
GCTGTTAAAAATGGAGCGAAATATGTAACAACTAGTTATGATAAACTTTGGTAA

Upstream 100 bases:

>100_bases
ATCCATTTACATGTCCACATGGTCGTCCAATAATCATTAATTTTTCAAAATACGAATTAGAAAAATTATTTAAGCGTGTG
ATGTAGAGAGGATGAATCAA

Downstream 100 bases:

>100_bases
ATCATAAGTCTGCAAAAATTTCATTTTTCACGAGATTTAGTCATATAACATAATAAAAAAGCCGTTTTCATATGGGATAT
GTAATAAGGTATTTAAGGTA

Product: glycerol uptake operon antiterminator regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MNNNILPAIRNIKDLEKLIKTDYKMCVLLDMHIGHIKSIMELLKQNHIECFIHIDLIKGLSHDEFASEFIIQQYKPKGIV
STKSKVIKKAKSLNTLTIFRVFIIDSQALKRSIDLIKKVEPDFVEVLPGVASKAIHHIQKETNTQVIAGGLINTIDEVNE
AVKNGAKYVTTSYDKLW

Sequences:

>Translated_177_residues
MNNNILPAIRNIKDLEKLIKTDYKMCVLLDMHIGHIKSIMELLKQNHIECFIHIDLIKGLSHDEFASEFIIQQYKPKGIV
STKSKVIKKAKSLNTLTIFRVFIIDSQALKRSIDLIKKVEPDFVEVLPGVASKAIHHIQKETNTQVIAGGLINTIDEVNE
AVKNGAKYVTTSYDKLW
>Mature_177_residues
MNNNILPAIRNIKDLEKLIKTDYKMCVLLDMHIGHIKSIMELLKQNHIECFIHIDLIKGLSHDEFASEFIIQQYKPKGIV
STKSKVIKKAKSLNTLTIFRVFIIDSQALKRSIDLIKKVEPDFVEVLPGVASKAIHHIQKETNTQVIAGGLINTIDEVNE
AVKNGAKYVTTSYDKLW

Specific function: In the presence of glycerol 3-phosphate, this protein is thought to enhance transcription [H]

COG id: COG1954

COG function: function code K; Glycerol-3-phosphate responsive antiterminator (mRNA-binding)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygcP [H]

Homologues:

Organism=Escherichia coli, GI1789127, Length=175, Percent_Identity=26.8571428571429, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006699 [H]

Pfam domain/function: PF04309 G3P_antiterm [H]

EC number: NA

Molecular weight: Translated: 20109; Mature: 20109

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNILPAIRNIKDLEKLIKTDYKMCVLLDMHIGHIKSIMELLKQNHIECFIHIDLIKGL
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCC
SHDEFASEFIIQQYKPKGIVSTKSKVIKKAKSLNTLTIFRVFIIDSQALKRSIDLIKKVE
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHCC
PDFVEVLPGVASKAIHHIQKETNTQVIAGGLINTIDEVNEAVKNGAKYVTTSYDKLW
CHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCCEEECCHHHCC
>Mature Secondary Structure
MNNNILPAIRNIKDLEKLIKTDYKMCVLLDMHIGHIKSIMELLKQNHIECFIHIDLIKGL
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCC
SHDEFASEFIIQQYKPKGIVSTKSKVIKKAKSLNTLTIFRVFIIDSQALKRSIDLIKKVE
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHCC
PDFVEVLPGVASKAIHHIQKETNTQVIAGGLINTIDEVNEAVKNGAKYVTTSYDKLW
CHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCCEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8436953; 9579061; 9384377 [H]