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The map label for this gene is ylmH [H]

Identifier: 15924181

GI number: 15924181

Start: 1246139

End: 1246777

Strand: Direct

Name: ylmH [H]

Synonym: SAV1191

Alternate gene names: 15924181

Gene position: 1246139-1246777 (Clockwise)

Preceding gene: 15924180

Following gene: 15924182

Centisome position: 43.29

GC content: 30.99

Gene sequence:

>639_bases
TTGGAAGTGATTTGTGGCAGTTATGAAGATTTAAACGTCTCTTTTTATGGCGGGCCTAATGCTGAAAGAAAAAGAGCAAT
CATTTCGCCGAACTATTATGAACCTAAAGAAAGTGACTTTGAATTAACTTTAATGGAAATAGAGTATCCTGAAAAATTCG
TCACTTTAAAACATCAACATATTTTAGGGACATTAATGTCTTTAGGTATCGAACGCGAACAAGTTGGAGATATAATTGTG
AATGAACGAATTCAATTTGTTTTGACAAGTAGATTGGAATCATTTATTATGTTAGAATTACAACGTATTAAAGGCGCATC
AGTTAAACTTTATACTATTCCAGTAACAGATATGATACAATCTAATGAGAATTGGAAAAATGAAAGTGCAACAGTTAGTT
CTTTAAGGTTAGATGTTGTTATTAAAGAAATGATACGTAAATCACGTACGATTGCGAAACAACTAATTGAAAAAAAACGT
GTTAAAGTGAATCACACTATTGTTGATTCAGCAGATTTTCAATTACAAGCAAATGATTTAATATCCATCCAAGGTTTTGG
TAGAGCACACATTACTGACTTAGGTGGTAAAACTAAAAAAGATAAAACGCACATTACCTATAGAACATTATTCAAATAG

Upstream 100 bases:

>100_bases
ATACGAATTAATTGATCAGCTAACGGATAAATGTGATCAAGCGGAACAACATTATGCACCAGTATTAACGCATTTTTTAG
ATCCAAGAGGGCAATATATA

Downstream 100 bases:

>100_bases
TAATGATTTAAGGAGGATAACAAATGCCTTTTACACCAAATGAAATTAAGAATAAAGAGTTTTCACGTGTAAAGAATGGT
TTAGAACCTACTGAAGTTGC

Product: YlmH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MEVICGSYEDLNVSFYGGPNAERKRAIISPNYYEPKESDFELTLMEIEYPEKFVTLKHQHILGTLMSLGIEREQVGDIIV
NERIQFVLTSRLESFIMLELQRIKGASVKLYTIPVTDMIQSNENWKNESATVSSLRLDVVIKEMIRKSRTIAKQLIEKKR
VKVNHTIVDSADFQLQANDLISIQGFGRAHITDLGGKTKKDKTHITYRTLFK

Sequences:

>Translated_212_residues
MEVICGSYEDLNVSFYGGPNAERKRAIISPNYYEPKESDFELTLMEIEYPEKFVTLKHQHILGTLMSLGIEREQVGDIIV
NERIQFVLTSRLESFIMLELQRIKGASVKLYTIPVTDMIQSNENWKNESATVSSLRLDVVIKEMIRKSRTIAKQLIEKKR
VKVNHTIVDSADFQLQANDLISIQGFGRAHITDLGGKTKKDKTHITYRTLFK
>Mature_212_residues
MEVICGSYEDLNVSFYGGPNAERKRAIISPNYYEPKESDFELTLMEIEYPEKFVTLKHQHILGTLMSLGIEREQVGDIIV
NERIQFVLTSRLESFIMLELQRIKGASVKLYTIPVTDMIQSNENWKNESATVSSLRLDVVIKEMIRKSRTIAKQLIEKKR
VKVNHTIVDSADFQLQANDLISIQGFGRAHITDLGGKTKKDKTHITYRTLFK

Specific function: Unknown

COG id: COG2302

COG function: function code S; Uncharacterized conserved protein, contains S4-like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 24368; Mature: 24368

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVICGSYEDLNVSFYGGPNAERKRAIISPNYYEPKESDFELTLMEIEYPEKFVTLKHQH
CCEEECCCCCCEEEEECCCCHHHCEEEECCCCCCCCCCCEEEEEEEEECCHHHHHHHHHH
ILGTLMSLGIEREQVGDIIVNERIQFVLTSRLESFIMLELQRIKGASVKLYTIPVTDMIQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHH
SNENWKNESATVSSLRLDVVIKEMIRKSRTIAKQLIEKKRVKVNHTIVDSADFQLQANDL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCEEECCCE
ISIQGFGRAHITDLGGKTKKDKTHITYRTLFK
EEEECCCCEEEECCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MEVICGSYEDLNVSFYGGPNAERKRAIISPNYYEPKESDFELTLMEIEYPEKFVTLKHQH
CCEEECCCCCCEEEEECCCCHHHCEEEECCCCCCCCCCCEEEEEEEEECCHHHHHHHHHH
ILGTLMSLGIEREQVGDIIVNERIQFVLTSRLESFIMLELQRIKGASVKLYTIPVTDMIQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHH
SNENWKNESATVSSLRLDVVIKEMIRKSRTIAKQLIEKKRVKVNHTIVDSADFQLQANDL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCEEECCCE
ISIQGFGRAHITDLGGKTKKDKTHITYRTLFK
EEEECCCCEEEECCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9045828; 9384377 [H]