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The map label for this gene is xtmA [H]

Identifier: 15923790

GI number: 15923790

Start: 878043

End: 878612

Strand: Direct

Name: xtmA [H]

Synonym: SAV0800

Alternate gene names: 15923790

Gene position: 878043-878612 (Clockwise)

Preceding gene: 15923789

Following gene: 15923791

Centisome position: 30.5

GC content: 36.32

Gene sequence:

>570_bases
ATGAGTGAGTTAACGGCAAAACAAGCGCGTTTTGTGAATGAGTATATAAGAACACTTAATGTAACACAAAGTGCCATAAA
AGCAGGCTATAGCGCAAATAGCGCACATGTGACAGGGTGTAGGTTATTGAAGAAGCCACACATCAAGCAATATATACAAG
AACAAAAAGATAAGATTATAGATGAGAATGTATTAACCGCAAAAGAGTTACTACATGTGCTTACGAATGCGGCAGTCGGT
GATGAAACAGAAACGAAAGAAGTTGTAGTAAAGCGTGGAGAATATAAAGAGAATCCACAAAGTGGCAAAGTACAATTAGT
CTATAATGAACATGTTGAACTGATAGAGGTACCAATAAAACCTAGTGATCGTTTAAAAGCTCGTGATATGTTGGGGAAAT
ACCATAAGTTATTTACAGATAAGCATGATATTAACGGGAATGTCCCTATATTCATTAATATTGGTGAATGGGACGGAGAC
GATGAGGAATTAGATAAAACTGTAAAAGATGTATCTAACGCTAATCCTAACCATACTGTGATTGTGGATGATATACCGTT
AGAGGATTGA

Upstream 100 bases:

>100_bases
GACGTAGTTTTAAAGATATTAGCAATGTCTTAGAGTGTTCAGAACAATCTGTAAGATTATGGTATGAAACCTTATTAGAT
AAAATTGTGGAGGTGATAGA

Downstream 100 bases:

>100_bases
AGAAAATGAAGCTATGCTATTTATAAATTAATACTAATTAGTTTGATACCATAGCTTATTTACTGAGAAAGTAGACTTAA
ATGTAACAACACCAGTGTTT

Product: bacteriophage terminase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSELTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLKKPHIKQYIQEQKDKIIDENVLTAKELLHVLTNAAVG
DETETKEVVVKRGEYKENPQSGKVQLVYNEHVELIEVPIKPSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGD
DEELDKTVKDVSNANPNHTVIVDDIPLED

Sequences:

>Translated_189_residues
MSELTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLKKPHIKQYIQEQKDKIIDENVLTAKELLHVLTNAAVG
DETETKEVVVKRGEYKENPQSGKVQLVYNEHVELIEVPIKPSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGD
DEELDKTVKDVSNANPNHTVIVDDIPLED
>Mature_188_residues
SELTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLKKPHIKQYIQEQKDKIIDENVLTAKELLHVLTNAAVGD
ETETKEVVVKRGEYKENPQSGKVQLVYNEHVELIEVPIKPSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGDD
EELDKTVKDVSNANPNHTVIVDDIPLED

Specific function: Functions as a terminase [H]

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqaS and B.subtilis phage SPP1 terminase small subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018925
- InterPro:   IPR005335 [H]

Pfam domain/function: PF10668 Phage_terminase; PF03592 Terminase_2 [H]

EC number: NA

Molecular weight: Translated: 21387; Mature: 21256

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLKKPHIKQYIQEQKDKII
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
DENVLTAKELLHVLTNAAVGDETETKEVVVKRGEYKENPQSGKVQLVYNEHVELIEVPIK
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEEECCC
PSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGDDEELDKTVKDVSNANPNHTV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEE
IVDDIPLED
EEECCCCCC
>Mature Secondary Structure 
SELTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLKKPHIKQYIQEQKDKII
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
DENVLTAKELLHVLTNAAVGDETETKEVVVKRGEYKENPQSGKVQLVYNEHVELIEVPIK
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEEECCC
PSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGDDEELDKTVKDVSNANPNHTV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEE
IVDDIPLED
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083174; 9384377 [H]