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The map label for this gene is 15923385

Identifier: 15923385

GI number: 15923385

Start: 438216

End: 438698

Strand: Reverse

Name: 15923385

Synonym: SAV0395

Alternate gene names: NA

Gene position: 438698-438216 (Counterclockwise)

Preceding gene: 15923386

Following gene: 15923384

Centisome position: 15.24

GC content: 34.58

Gene sequence:

>483_bases
ATGAAGGGAGATAAAGAAGCACATGCCACTCCCTTTCACGACAGAAAGGGGGTGAAAAGCATGAAACCATCTTCTTTTCA
AGAAACCATAGAAAATCAGTTTGACTATATCTGCAAACAAGTTATTGAAGATGAACGAAAAGATTACTTCAAACATCTAG
ACAGACTATCAGCAAAAGAAGTCTCGTTTTCTGATATAGATAACTACCTTGTCAACTCTTTTTCTACTGTTGATACGTAC
GTCACTGATTTCCAACTATTTAAATTATTTGGATTAAGAATCAATGTTGAAAGTGATTTATTAAGTGAAGCCCTGCGTCA
TCTTTCAGAGAAAAAACGGAACATTATTTTACTTCATTACTTTATGGATATGAGTGATGTGGAGATTGCGGAGTTACTAA
ATTTGAATCGTTCGACTGTTTATCGTCATCGAATAAGTGGACTAGCCATGATTAAAGAATTCATGAAGGAGTGTAAAGAA
TGA

Upstream 100 bases:

>100_bases
AAAACAATCTGTTTATGTGCTTTTTTGGTCACTTAATAAATATCTTTTAGGATTTCTCTTCATTTATGCAACAAATCCCC
CTTTCGTGTCGGGGTTTAGT

Downstream 100 bases:

>100_bases
AAACAGCTTATCCAAGGGTTCCCTTCCCCCTCATTGTAAAGGCGACAGATGGCGACGTGGAAGCAATTAATCAGATTGTT
AAACATTATCGAGGGTATAC

Product: hypothetical protein

Products: NA

Alternate protein names: Sigma-70 Region 4 Subfamily; ECF Subfamily RNA Polymerase Sigma-24 Factor; Conjugative Transposon Regulatory Protein; Ypothetical Protein SMU.

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKGDKEAHATPFHDRKGVKSMKPSSFQETIENQFDYICKQVIEDERKDYFKHLDRLSAKEVSFSDIDNYLVNSFSTVDTY
VTDFQLFKLFGLRINVESDLLSEALRHLSEKKRNIILLHYFMDMSDVEIAELLNLNRSTVYRHRISGLAMIKEFMKECKE

Sequences:

>Translated_160_residues
MKGDKEAHATPFHDRKGVKSMKPSSFQETIENQFDYICKQVIEDERKDYFKHLDRLSAKEVSFSDIDNYLVNSFSTVDTY
VTDFQLFKLFGLRINVESDLLSEALRHLSEKKRNIILLHYFMDMSDVEIAELLNLNRSTVYRHRISGLAMIKEFMKECKE
>Mature_160_residues
MKGDKEAHATPFHDRKGVKSMKPSSFQETIENQFDYICKQVIEDERKDYFKHLDRLSAKEVSFSDIDNYLVNSFSTVDTY
VTDFQLFKLFGLRINVESDLLSEALRHLSEKKRNIILLHYFMDMSDVEIAELLNLNRSTVYRHRISGLAMIKEFMKECKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18885; Mature: 18885

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGDKEAHATPFHDRKGVKSMKPSSFQETIENQFDYICKQVIEDERKDYFKHLDRLSAKE
CCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFSDIDNYLVNSFSTVDTYVTDFQLFKLFGLRINVESDLLSEALRHLSEKKRNIILLHY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEHE
FMDMSDVEIAELLNLNRSTVYRHRISGLAMIKEFMKECKE
ECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGDKEAHATPFHDRKGVKSMKPSSFQETIENQFDYICKQVIEDERKDYFKHLDRLSAKE
CCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFSDIDNYLVNSFSTVDTYVTDFQLFKLFGLRINVESDLLSEALRHLSEKKRNIILLHY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEHE
FMDMSDVEIAELLNLNRSTVYRHRISGLAMIKEFMKECKE
ECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA