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The map label for this gene is rps19E [H]

Identifier: 161777479

GI number: 161777479

Start: 301042

End: 301506

Strand: Reverse

Name: rps19E [H]

Synonym: SSO0353

Alternate gene names: 161777479

Gene position: 301506-301042 (Counterclockwise)

Preceding gene: 15897292

Following gene: 15897289

Centisome position: 10.08

GC content: 34.19

Gene sequence:

>465_bases
ATGATAACAGCTGAAATGGTACCTCCAGATCTTTTGATAAAACGGTTAGCAATATATCTAAAGGAGAATGTGAAAACTGT
AGATCCACCAGAGTGGGCACTATTAGCTAAAACAGCTAGCTTTAAGGAAAGAGTACCAGATAACGCAGAGGATTGGTGGT
ATATAAGAGCCGCATCATTACTAAGAAAACTTTACGTTAACTCAATTATTGGAATAGAAAAAACAAGAACAATTTACGGT
GGAAGAAAAAGAAGGGGGACTAGACCAGAAAAATTTGTAAAAGCTCCTGGTCATGTAAATAGATTAATATTTCAACAATT
AGAAAAAGCTGGGCTAGTCCAAAAAATTAAGAATAAGGGAAGATCTTTAAGTCCTAAAGGAAGGTCATTATTAGATAAAT
TAGCGTTGGAAATCTTTAAAGAGCTGGCTGAGAATAATACTTCTTTGAAGGTATACTTGGAATAA

Upstream 100 bases:

>100_bases
CTGCTTAAAATCGGCTATATAAAACTCCATTCGAGATCATATGTTATTAAAAAGGATAAATTTTAAACCTTATATACTAC
GAATGTAATTGAGTCTTATA

Downstream 100 bases:

>100_bases
GGGGTGAAAAGATGTCAACTCCAAACTCATATGATGATGAAGAATTAGAAGAATTATTAAGAAGAAAAGCTGCACAAGAG
CAAAAAAGAATAGAAGAAGA

Product: 30S ribosomal protein S19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MITAEMVPPDLLIKRLAIYLKENVKTVDPPEWALLAKTASFKERVPDNAEDWWYIRAASLLRKLYVNSIIGIEKTRTIYG
GRKRRGTRPEKFVKAPGHVNRLIFQQLEKAGLVQKIKNKGRSLSPKGRSLLDKLALEIFKELAENNTSLKVYLE

Sequences:

>Translated_154_residues
MITAEMVPPDLLIKRLAIYLKENVKTVDPPEWALLAKTASFKERVPDNAEDWWYIRAASLLRKLYVNSIIGIEKTRTIYG
GRKRRGTRPEKFVKAPGHVNRLIFQQLEKAGLVQKIKNKGRSLSPKGRSLLDKLALEIFKELAENNTSLKVYLE
>Mature_154_residues
MITAEMVPPDLLIKRLAIYLKENVKTVDPPEWALLAKTASFKERVPDNAEDWWYIRAASLLRKLYVNSIIGIEKTRTIYG
GRKRRGTRPEKFVKAPGHVNRLIFQQLEKAGLVQKIKNKGRSLSPKGRSLLDKLALEIFKELAENNTSLKVYLE

Specific function: Unknown

COG id: COG2238

COG function: function code J; Ribosomal protein S19E (S16A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S19e family [H]

Homologues:

Organism=Homo sapiens, GI4506695, Length=137, Percent_Identity=36.4963503649635, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17508697, Length=126, Percent_Identity=43.6507936507937, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6324027, Length=140, Percent_Identity=35.7142857142857, Blast_Score=94, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6324451, Length=140, Percent_Identity=35.7142857142857, Blast_Score=94, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24649452, Length=152, Percent_Identity=34.2105263157895, Blast_Score=98, Evalue=2e-21,
Organism=Drosophila melanogaster, GI17647891, Length=141, Percent_Identity=39.7163120567376, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24642576, Length=141, Percent_Identity=39.7163120567376, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24642574, Length=141, Percent_Identity=39.7163120567376, Blast_Score=94, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001266
- InterPro:   IPR018277
- ProDom:   PD003854 [H]

Pfam domain/function: PF01090 Ribosomal_S19e [H]

EC number: NA

Molecular weight: Translated: 17674; Mature: 17674

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITAEMVPPDLLIKRLAIYLKENVKTVDPPEWALLAKTASFKERVPDNAEDWWYIRAASL
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LRKLYVNSIIGIEKTRTIYGGRKRRGTRPEKFVKAPGHVNRLIFQQLEKAGLVQKIKNKG
HHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
RSLSPKGRSLLDKLALEIFKELAENNTSLKVYLE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEC
>Mature Secondary Structure
MITAEMVPPDLLIKRLAIYLKENVKTVDPPEWALLAKTASFKERVPDNAEDWWYIRAASL
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LRKLYVNSIIGIEKTRTIYGGRKRRGTRPEKFVKAPGHVNRLIFQQLEKAGLVQKIKNKG
HHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
RSLSPKGRSLLDKLALEIFKELAENNTSLKVYLE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]