Click here to switch to the map view.

The map label for this gene is yoaE [H]

Identifier: 15899895

GI number: 15899895

Start: 2937943

End: 2939055

Strand: Reverse

Name: yoaE [H]

Synonym: SSO3191

Alternate gene names: 15899895

Gene position: 2939055-2937943 (Counterclockwise)

Preceding gene: 15899896

Following gene: 15899893

Centisome position: 98.22

GC content: 35.58

Gene sequence:

>1113_bases
ATGGTTCACGCTTGCACAAGAGACTGTTATGATACTTGTATATTTGACGATAATCATAAACCAATTGATACATTTCCTTT
TAACGGGTTTACATGTTCTAGAGGTATAGCGGATTTAAAGAGAAACTCATTGAATAGAGTCGATAGCGTTTATATAGAAG
GCAAATTAAGCAATATTGATGAAGCATTAGACTTAATAGTTAAGGAGATAAGAAAACGTAAAAAAGAGGAAATTCTTCAC
GTTGATTATGATGGAAACCAAGGTCTATTAACGTGGTATTACCCAGCAAGATTATGGAACGTAATAGGTGCAGCATCAAC
TGACTACTCAATATGTAGTTCAGAAGGTCATGAGGCAATTAAGTTACATTACGGTAATTCAATAGGCGCTTTACCAGAGG
ATTTTCTTAAGTACGAGTCGTTTGTCATATGGGGAAGTGAATTAGTATTTAGTTTCATCCATGGTTGGAATCTGATTAGA
GATAAGTATAAGGCAACGATCGATGTTAGGATATCGGAAACCGCTAAGAGGAGTAATAAATACTATATTGTGAAACCTGG
GAGTGACGTATATTTAGCAATAGGGATCATAAAGAGATTATTTGAGAGAAATTGGGCTGACTTATCACTCTTAGATGAGC
CAGAGGAATTAAGGAACTATGTATACTCATTTAATGATGAAGAAATTGAAGAAGCTACTGGTCTGGATTCCTCAAAAATT
GATGAGTTAGCTGAACTGTACTACTATAGAAGACCTTTAACAATTATTGGATTTGCGTTAGGTAGGAGCATAAATGGAGG
TGACGCTATCTCATTAATCTCATTAATACCGGCATTAATTGGGATGAAAAAGGGGTTTTTCTACGCTAATTCTCAAGGAC
TCGGAATAGATTTTAAATATTTGCCGAGGACTTCACAAATACTCTCCTTCAAGAATTGTAGGTATGCTGAAGTTGGTAAG
GAGATTGAAGAGGGTAAGATAACGTTTATGTTTGTTTGGAATTCTAACCCCTTACACTCATTACCAATGTCTGATAGAAT
CTATGATGCTGTAAAGGAGGTTAGGTTATTTCTAGTTGTACATGATCCATACTGTCAGAAACTCCTAAGATAG

Upstream 100 bases:

>100_bases
TTCTACTAAGGTTTTCAGCTTAAAGGAATTTCGTCACATTTCAGGTACGGTCGCTCTCTTCACTCAAACTTAAATTCTGT
ATTTTCCTATTTAAAAAATA

Downstream 100 bases:

>100_bases
CTAATGTAGTATTACCAGTTCCCACATATCTTGAGAAAGAGAACCGTGGTTTACCAGTTATTGCCACAATAATCTAGTTT
TCAATAACCCAATTCTACCT

Product: formate dehydrogenase (amino end fragment)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MVHACTRDCYDTCIFDDNHKPIDTFPFNGFTCSRGIADLKRNSLNRVDSVYIEGKLSNIDEALDLIVKEIRKRKKEEILH
VDYDGNQGLLTWYYPARLWNVIGAASTDYSICSSEGHEAIKLHYGNSIGALPEDFLKYESFVIWGSELVFSFIHGWNLIR
DKYKATIDVRISETAKRSNKYYIVKPGSDVYLAIGIIKRLFERNWADLSLLDEPEELRNYVYSFNDEEIEEATGLDSSKI
DELAELYYYRRPLTIIGFALGRSINGGDAISLISLIPALIGMKKGFFYANSQGLGIDFKYLPRTSQILSFKNCRYAEVGK
EIEEGKITFMFVWNSNPLHSLPMSDRIYDAVKEVRLFLVVHDPYCQKLLR

Sequences:

>Translated_370_residues
MVHACTRDCYDTCIFDDNHKPIDTFPFNGFTCSRGIADLKRNSLNRVDSVYIEGKLSNIDEALDLIVKEIRKRKKEEILH
VDYDGNQGLLTWYYPARLWNVIGAASTDYSICSSEGHEAIKLHYGNSIGALPEDFLKYESFVIWGSELVFSFIHGWNLIR
DKYKATIDVRISETAKRSNKYYIVKPGSDVYLAIGIIKRLFERNWADLSLLDEPEELRNYVYSFNDEEIEEATGLDSSKI
DELAELYYYRRPLTIIGFALGRSINGGDAISLISLIPALIGMKKGFFYANSQGLGIDFKYLPRTSQILSFKNCRYAEVGK
EIEEGKITFMFVWNSNPLHSLPMSDRIYDAVKEVRLFLVVHDPYCQKLLR
>Mature_370_residues
MVHACTRDCYDTCIFDDNHKPIDTFPFNGFTCSRGIADLKRNSLNRVDSVYIEGKLSNIDEALDLIVKEIRKRKKEEILH
VDYDGNQGLLTWYYPARLWNVIGAASTDYSICSSEGHEAIKLHYGNSIGALPEDFLKYESFVIWGSELVFSFIHGWNLIR
DKYKATIDVRISETAKRSNKYYIVKPGSDVYLAIGIIKRLFERNWADLSLLDEPEELRNYVYSFNDEEIEEATGLDSSKI
DELAELYYYRRPLTIIGFALGRSINGGDAISLISLIPALIGMKKGFFYANSQGLGIDFKYLPRTSQILSFKNCRYAEVGK
EIEEGKITFMFVWNSNPLHSLPMSDRIYDAVKEVRLFLVVHDPYCQKLLR

Specific function: Terminal Reductase During Anaerobic Growth On Various Sulfoxide And N-Oxide Compounds (By Similarity). [C]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasm Face Of The Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR006963
- InterPro:   IPR006655 [H]

Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: 1.8.99.- [C]

Molecular weight: Translated: 42530; Mature: 42530

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHACTRDCYDTCIFDDNHKPIDTFPFNGFTCSRGIADLKRNSLNRVDSVYIEGKLSNID
CCCCCCHHHHHHHEECCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHEEEEECCCCCHH
EALDLIVKEIRKRKKEEILHVDYDGNQGLLTWYYPARLWNVIGAASTDYSICSSEGHEAI
HHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEECHHHHHHHHHCCCCCCHHHCCCCCCEE
KLHYGNSIGALPEDFLKYESFVIWGSELVFSFIHGWNLIRDKYKATIDVRISETAKRSNK
EEEECCCCCCCCHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHCEEEEEEEEHHHHHCCC
YYIVKPGSDVYLAIGIIKRLFERNWADLSLLDEPEELRNYVYSFNDEEIEEATGLDSSKI
EEEEECCCCEEEHHHHHHHHHHCCCCCCEECCCHHHHHHHHHCCCHHHHHHHCCCCHHHH
DELAELYYYRRPLTIIGFALGRSINGGDAISLISLIPALIGMKKGFFYANSQGLGIDFKY
HHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEE
LPRTSQILSFKNCRYAEVGKEIEEGKITFMFVWNSNPLHSLPMSDRIYDAVKEVRLFLVV
CCCCHHHHHHCCCCHHHHCCHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHEEEEEEE
HDPYCQKLLR
ECHHHHHHCC
>Mature Secondary Structure
MVHACTRDCYDTCIFDDNHKPIDTFPFNGFTCSRGIADLKRNSLNRVDSVYIEGKLSNID
CCCCCCHHHHHHHEECCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHEEEEECCCCCHH
EALDLIVKEIRKRKKEEILHVDYDGNQGLLTWYYPARLWNVIGAASTDYSICSSEGHEAI
HHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEECHHHHHHHHHCCCCCCHHHCCCCCCEE
KLHYGNSIGALPEDFLKYESFVIWGSELVFSFIHGWNLIRDKYKATIDVRISETAKRSNK
EEEECCCCCCCCHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHCEEEEEEEEHHHHHCCC
YYIVKPGSDVYLAIGIIKRLFERNWADLSLLDEPEELRNYVYSFNDEEIEEATGLDSSKI
EEEEECCCCEEEHHHHHHHHHHCCCCCCEECCCHHHHHHHHHCCCHHHHHHHCCCCHHHH
DELAELYYYRRPLTIIGFALGRSINGGDAISLISLIPALIGMKKGFFYANSQGLGIDFKY
HHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEE
LPRTSQILSFKNCRYAEVGKEIEEGKITFMFVWNSNPLHSLPMSDRIYDAVKEVRLFLVV
CCCCHHHHHHCCCCHHHHCCHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHEEEEEEE
HDPYCQKLLR
ECHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: May Bind 4Fe-4S Cluster. [C]

Metal ions: Fe; Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]