| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is 15899808
Identifier: 15899808
GI number: 15899808
Start: 2850831
End: 2852477
Strand: Reverse
Name: 15899808
Synonym: SSO3099
Alternate gene names: NA
Gene position: 2852477-2850831 (Counterclockwise)
Preceding gene: 15899809
Following gene: 15899807
Centisome position: 95.33
GC content: 35.64
Gene sequence:
>1647_bases ATGGCTAGTCCTCCTACTTCCCCCTTAACGGTTTTCGCAACAATTCTAATTTCAGCTAGTTCAAGTCCTACAATACACGT GTATTATCAAAGATATGATAGTGTATACAGAGCCTCCGGTATTAATGGTCCATTAAGTGCAAGTACAGTAACTTATACTG TAAGTTCAGCTACATACAATACAACCCTAAGTGACGGCAAAGCGTTTAAGGTAACGTACAATAGAACAGTTTACACTTTA TTATTTGCTTCTTCTCCAGAAAAATTTGAGGGATATGTTAACGTATCAGCTTATACTAATAACACCATTACGATAAAAAC TGACTTACCTGATTTAATAAGAATAGTGATAATGAGTGCAAATGAGACAGAATTGATATGGGCTGGTTTTAATGCTACTG ATATTAACGCTTATGCATATATTAATGGAACAAGTGAAGTTATGCTTCAATTCGCAAACGGTTCCACAATAGCTAATGCA ACATTGGCAATTAATAAAGAAAATGTAAGTATAAGCAATAAAATAAGCCTATACTTATTCCCGGTAACATCTGTAGAGGC TAAAGTATCGGTTAGTGGAGAGCTAACTGCTACAGCGCAAATACCAAGGAGATATTCTCCATTACTGGTCAGTATTAACT ATAATGGGACAGAAAGCAACGCAACTGTTAATGGATATAAGGTTACTACAGCGTACTTTAATGGCACACTGACTCCTGCC TTATTTTGGAAAGGAGAAGGCTTAGTTCCAGTAATGTCAGGTAAGGGAAACATACGTGCAGATTTTGAGACGATAGAATT TTATGGAGTAAATGGTACAATTCTAGGATATGTACACATTTCGAGTATTGTTGGAAATCTAGAGATGATTCCAGTTAAGA TTGGACTTAATTATAACATCGCATTTACTGAACTTAAGATAGTTACGGTAAGTGGAGTAAAACAAGTACATGCAAACTTT ATGGGTTACACTTACATTAATGGAGTCCCAGTAATGATAGTAGGAAACGATGAAGGTAATATAACGTCAACTGCAATCGT TAACATTTCTCATTTAGTCATAGTGAATAATCATAAAGGCGTGCTAGCGGAAATAACGTTAAATTCAACGTCAAAATTCG TAGTATTAACAGAAGCCAATACTACTCATAATGTTAGCGTAACACTTCCGCTATTGGTAAACGTTACCAATGTGCATTTA AACGGTAACGTTCATGTGGCACAGAAGGTCGTAGTCAACGTGTCTTCACAATACATCCTATTCAACGTTACGACGCTTAA TAATGGTTCCATAATTGGCGTCTATAAGGTAGAGAATGATACATTAGTTAAATTAAACTCTTCCAATTACTTCATCATAA ATGGAAAACTGGAAATATTTGACGATCCATCTTCAACATATTATGTAGTTTACTCCGCACAACCAACTTCTTCAACGACA TCCTCTACTACTTTAACATCCACAAGTACATCTAGTGCATCCACTACCGCAAGTGTCTCTACTACTTTAACATCCACGAC ATCTCCTTCAGCCACATCTAATATAACAGCAACTTCATCATCAAATACTATGACATATATAGCGATTGGAATAATTGTGC TAATAGTTATAATAGTAATAGCCGTGGTGTTAGTTAGAAGAAGGTAA
Upstream 100 bases:
>100_bases ATATAAATCTAGTGAAGAAATTATTTGAAATTCAACCCGTTTCATGAAGCGGAACGACTTAACCCTTATATAGGGGAAAC GTCCTACTATCTCACATGAA
Downstream 100 bases:
>100_bases AAATTCTTTTTTAAATGTTTTTTGTCCTTTTCCTTTGTTATTAGTAGAAAAATTTATATACTTTAGGGTTACCCTAATAC CATATGAGAGGAAAAGAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 548; Mature: 547
Protein sequence:
>548_residues MASPPTSPLTVFATILISASSSPTIHVYYQRYDSVYRASGINGPLSASTVTYTVSSATYNTTLSDGKAFKVTYNRTVYTL LFASSPEKFEGYVNVSAYTNNTITIKTDLPDLIRIVIMSANETELIWAGFNATDINAYAYINGTSEVMLQFANGSTIANA TLAINKENVSISNKISLYLFPVTSVEAKVSVSGELTATAQIPRRYSPLLVSINYNGTESNATVNGYKVTTAYFNGTLTPA LFWKGEGLVPVMSGKGNIRADFETIEFYGVNGTILGYVHISSIVGNLEMIPVKIGLNYNIAFTELKIVTVSGVKQVHANF MGYTYINGVPVMIVGNDEGNITSTAIVNISHLVIVNNHKGVLAEITLNSTSKFVVLTEANTTHNVSVTLPLLVNVTNVHL NGNVHVAQKVVVNVSSQYILFNVTTLNNGSIIGVYKVENDTLVKLNSSNYFIINGKLEIFDDPSSTYYVVYSAQPTSSTT SSTTLTSTSTSSASTTASVSTTLTSTTSPSATSNITATSSSNTMTYIAIGIIVLIVIIVIAVVLVRRR
Sequences:
>Translated_548_residues MASPPTSPLTVFATILISASSSPTIHVYYQRYDSVYRASGINGPLSASTVTYTVSSATYNTTLSDGKAFKVTYNRTVYTL LFASSPEKFEGYVNVSAYTNNTITIKTDLPDLIRIVIMSANETELIWAGFNATDINAYAYINGTSEVMLQFANGSTIANA TLAINKENVSISNKISLYLFPVTSVEAKVSVSGELTATAQIPRRYSPLLVSINYNGTESNATVNGYKVTTAYFNGTLTPA LFWKGEGLVPVMSGKGNIRADFETIEFYGVNGTILGYVHISSIVGNLEMIPVKIGLNYNIAFTELKIVTVSGVKQVHANF MGYTYINGVPVMIVGNDEGNITSTAIVNISHLVIVNNHKGVLAEITLNSTSKFVVLTEANTTHNVSVTLPLLVNVTNVHL NGNVHVAQKVVVNVSSQYILFNVTTLNNGSIIGVYKVENDTLVKLNSSNYFIINGKLEIFDDPSSTYYVVYSAQPTSSTT SSTTLTSTSTSSASTTASVSTTLTSTTSPSATSNITATSSSNTMTYIAIGIIVLIVIIVIAVVLVRRR >Mature_547_residues ASPPTSPLTVFATILISASSSPTIHVYYQRYDSVYRASGINGPLSASTVTYTVSSATYNTTLSDGKAFKVTYNRTVYTLL FASSPEKFEGYVNVSAYTNNTITIKTDLPDLIRIVIMSANETELIWAGFNATDINAYAYINGTSEVMLQFANGSTIANAT LAINKENVSISNKISLYLFPVTSVEAKVSVSGELTATAQIPRRYSPLLVSINYNGTESNATVNGYKVTTAYFNGTLTPAL FWKGEGLVPVMSGKGNIRADFETIEFYGVNGTILGYVHISSIVGNLEMIPVKIGLNYNIAFTELKIVTVSGVKQVHANFM GYTYINGVPVMIVGNDEGNITSTAIVNISHLVIVNNHKGVLAEITLNSTSKFVVLTEANTTHNVSVTLPLLVNVTNVHLN GNVHVAQKVVVNVSSQYILFNVTTLNNGSIIGVYKVENDTLVKLNSSNYFIINGKLEIFDDPSSTYYVVYSAQPTSSTTS STTLTSTSTSSASTTASVSTTLTSTTSPSATSNITATSSSNTMTYIAIGIIVLIVIIVIAVVLVRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58758; Mature: 58627
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPPTSPLTVFATILISASSSPTIHVYYQRYDSVYRASGINGPLSASTVTYTVSSATYN CCCCCCCCHHEEEEEEEECCCCCEEEEEEEECCCEEECCCCCCCCCCCEEEEEEECCEEE TTLSDGKAFKVTYNRTVYTLLFASSPEKFEGYVNVSAYTNNTITIKTDLPDLIRIVIMSA EEECCCEEEEEEECCEEEEEEEECCCCCCEEEEEEEEEECCEEEEEECCCHHEEEEEECC NETELIWAGFNATDINAYAYINGTSEVMLQFANGSTIANATLAINKENVSISNKISLYLF CCCEEEEEECCCCCEEEEEEECCCHHEEEEEECCCEEEEEEEEEEECCCEEECEEEEEEE PVTSVEAKVSVSGELTATAQIPRRYSPLLVSINYNGTESNATVNGYKVTTAYFNGTLTPA EECCEEEEEEECCEEEEEEECCCCCCCEEEEEEECCCCCCEEECCEEEEEEEECCCCCEE LFWKGEGLVPVMSGKGNIRADFETIEFYGVNGTILGYVHISSIVGNLEMIPVKIGLNYNI EEECCCCEEEEECCCCCEEEEEEEEEEEECCCEEEEEEEEEHHHCCEEEEEEEEECEEEE AFTELKIVTVSGVKQVHANFMGYTYINGVPVMIVGNDEGNITSTAIVNISHLVIVNNHKG EEEEEEEEEECCHHHHHHCEEEEEEECCEEEEEEECCCCCEEEEEEEEEEEEEEEECCCC VLAEITLNSTSKFVVLTEANTTHNVSVTLPLLVNVTNVHLNGNVHVAQKVVVNVSSQYIL EEEEEEECCCCEEEEEEECCCCEEEEEEEEEEEEEEEEEECCCEEEEEEEEEEECCCEEE FNVTTLNNGSIIGVYKVENDTLVKLNSSNYFIINGKLEIFDDPSSTYYVVYSAQPTSSTT EEEEEECCCCEEEEEEECCCEEEEECCCCEEEEEEEEEEEECCCCCEEEEEECCCCCCCC SSTTLTSTSTSSASTTASVSTTLTSTTSPSATSNITATSSSNTMTYIAIGIIVLIVIIVI CCEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHH AVVLVRRR HHHHHCCC >Mature Secondary Structure ASPPTSPLTVFATILISASSSPTIHVYYQRYDSVYRASGINGPLSASTVTYTVSSATYN CCCCCCCHHEEEEEEEECCCCCEEEEEEEECCCEEECCCCCCCCCCCEEEEEEECCEEE TTLSDGKAFKVTYNRTVYTLLFASSPEKFEGYVNVSAYTNNTITIKTDLPDLIRIVIMSA EEECCCEEEEEEECCEEEEEEEECCCCCCEEEEEEEEEECCEEEEEECCCHHEEEEEECC NETELIWAGFNATDINAYAYINGTSEVMLQFANGSTIANATLAINKENVSISNKISLYLF CCCEEEEEECCCCCEEEEEEECCCHHEEEEEECCCEEEEEEEEEEECCCEEECEEEEEEE PVTSVEAKVSVSGELTATAQIPRRYSPLLVSINYNGTESNATVNGYKVTTAYFNGTLTPA EECCEEEEEEECCEEEEEEECCCCCCCEEEEEEECCCCCCEEECCEEEEEEEECCCCCEE LFWKGEGLVPVMSGKGNIRADFETIEFYGVNGTILGYVHISSIVGNLEMIPVKIGLNYNI EEECCCCEEEEECCCCCEEEEEEEEEEEECCCEEEEEEEEEHHHCCEEEEEEEEECEEEE AFTELKIVTVSGVKQVHANFMGYTYINGVPVMIVGNDEGNITSTAIVNISHLVIVNNHKG EEEEEEEEEECCHHHHHHCEEEEEEECCEEEEEEECCCCCEEEEEEEEEEEEEEEECCCC VLAEITLNSTSKFVVLTEANTTHNVSVTLPLLVNVTNVHLNGNVHVAQKVVVNVSSQYIL EEEEEEECCCCEEEEEEECCCCEEEEEEEEEEEEEEEEEECCCEEEEEEEEEEECCCEEE FNVTTLNNGSIIGVYKVENDTLVKLNSSNYFIINGKLEIFDDPSSTYYVVYSAQPTSSTT EEEEEECCCCEEEEEEECCCEEEEECCCCEEEEEEEEEEEECCCCCEEEEEECCCCCCCC SSTTLTSTSTSSASTTASVSTTLTSTTSPSATSNITATSSSNTMTYIAIGIIVLIVIIVI CCEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHH AVVLVRRR HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA