| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is soxH [H]
Identifier: 15899679
GI number: 15899679
Start: 2712932
End: 2713372
Strand: Reverse
Name: soxH [H]
Synonym: SSO2969
Alternate gene names: 15899679
Gene position: 2713372-2712932 (Counterclockwise)
Preceding gene: 15899680
Following gene: 15899678
Centisome position: 90.68
GC content: 36.73
Gene sequence:
>441_bases TTGGAAAAAGCAAGAATATTTGAACTATCAACCATCGTATTTGCAATTGTCATCTTAACGGTTTTAGGAGTTTTTTCAGA TATTTATCTAAACTCAATAAACACCGGAGCCTATCTATCGACTACTCAAAGACAAGACGCTATTCCAATTAAGGTAGTAG CTATGCAATACGCTTGGGAATTCATATACCCCAATGGTACTACCACTACTGATCAACTGGTATTAAAGGCTAATCAGACC TATTTACTTGAAATCACATCTAAGGATGTAATTCACGCATTCTATATACCACAGTTAGGGTTCAAGTTCGAAGCAATACC AGGGTATGTATACGATTTCTACATAGTGGTTAACAAGCCTGGAGTATATGATATATGGTGTGCCGAATTTTGTGGTCCTG GTCATTACTTAATGAAAGGAACCTTAGTAGTGGTGAGTTAG
Upstream 100 bases:
>100_bases TCAAACAATCCTATAATTAACCAGTTTTTAATAGGTCAATATTTAGGTTTTTCATTAGTTTTGTTCTCAATTTCAATTTT TATAAATGTGGTGATGGGAA
Downstream 100 bases:
>100_bases TATGGCTACTAATAGGAGGATGACTTCTAAGGACTACGCTCTGTGGATAGTTACCATATTAGCATTCTTCTTTTTCTTTC TATGGGTAGGGGATTTCGGA
Product: quinol oxidase-2, subunit II (soxH)
Products: NA
Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MEKARIFELSTIVFAIVILTVLGVFSDIYLNSINTGAYLSTTQRQDAIPIKVVAMQYAWEFIYPNGTTTTDQLVLKANQT YLLEITSKDVIHAFYIPQLGFKFEAIPGYVYDFYIVVNKPGVYDIWCAEFCGPGHYLMKGTLVVVS
Sequences:
>Translated_146_residues MEKARIFELSTIVFAIVILTVLGVFSDIYLNSINTGAYLSTTQRQDAIPIKVVAMQYAWEFIYPNGTTTTDQLVLKANQT YLLEITSKDVIHAFYIPQLGFKFEAIPGYVYDFYIVVNKPGVYDIWCAEFCGPGHYLMKGTLVVVS >Mature_146_residues MEKARIFELSTIVFAIVILTVLGVFSDIYLNSINTGAYLSTTQRQDAIPIKVVAMQYAWEFIYPNGTTTTDQLVLKANQT YLLEITSKDVIHAFYIPQLGFKFEAIPGYVYDFYIVVNKPGVYDIWCAEFCGPGHYLMKGTLVVVS
Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]
COG id: COG1622
COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
Organism=Escherichia coli, GI1786635, Length=96, Percent_Identity=36.4583333333333, Blast_Score=73, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001505 - InterPro: IPR008972 - InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR014222 - InterPro: IPR015964 - InterPro: IPR002429 - InterPro: IPR011759 [H]
Pfam domain/function: PF00116 COX2; PF02790 COX2_TM; PF00034 Cytochrom_C [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 16483; Mature: 16483
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00078 COX2 ; PS50857 COX2_CUA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKARIFELSTIVFAIVILTVLGVFSDIYLNSINTGAYLSTTQRQDAIPIKVVAMQYAWE CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEEEEE FIYPNGTTTTDQLVLKANQTYLLEITSKDVIHAFYIPQLGFKFEAIPGYVYDFYIVVNKP EEECCCCCCHHEEEEEECCEEEEEECCCCEEEEEECCCCCCEEECCCCEEEEEEEEEECC GVYDIWCAEFCGPGHYLMKGTLVVVS CCEEEEHHHHCCCCCEEEEEEEEEEC >Mature Secondary Structure MEKARIFELSTIVFAIVILTVLGVFSDIYLNSINTGAYLSTTQRQDAIPIKVVAMQYAWE CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEEEEE FIYPNGTTTTDQLVLKANQTYLLEITSKDVIHAFYIPQLGFKFEAIPGYVYDFYIVVNKP EEECCCCCCHHEEEEEECCEEEEEECCCCEEEEEECCCCCCEEECCCCEEEEEEEEEECC GVYDIWCAEFCGPGHYLMKGTLVVVS CCEEEEHHHHCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7678007 [H]