Click here to switch to the map view.

The map label for this gene is yaaH [C]

Identifier: 15899576

GI number: 15899576

Start: 2620566

End: 2621144

Strand: Direct

Name: yaaH [C]

Synonym: SSO2864

Alternate gene names: 15899576

Gene position: 2620566-2621144 (Clockwise)

Preceding gene: 15899570

Following gene: 15899581

Centisome position: 87.58

GC content: 42.66

Gene sequence:

>579_bases
TTGCTATATAAAGATGTCATGACAGAACAAAAAAGGGCAAATCCAGCCCCCTTAGGACTTTCTGGTTTCGCACTAACTAC
ACTCGTGTTATCTACCTTCAATGCAGGGTTAATAACACAAGGGGCATCTGTTGTGTTGGGACTAGCAGCGTTTTATGGAG
GATTGGCTCAACTACTAGCCGGAATATTGGAATGGAGGGCAGGGAACACTTTTGGCTATACTGCCTTCTTTACTTATGGT
GCATTTTGGGAGTGGTATTTCCTAACTGCGGGAGGATTTTTTGGAGGAGTCACACCTCAAGCTATAGGCTTGGTATTAAT
TGCGTTTGGAATCTTTACGCTAGCAATGTGGTTTGGCACGTTTAAGGCAAATCTAGGATTATTCATGACATTTCTATTAC
TGTGGATAACGTTCTTCCTACTTGGAGTAGGAGCTATGATTGGAAATGTTGGATTATCCCATGCCGGTGGATATGTAGGA
ATATTAACGGCAATTGCAGCCTGGTATACTGGACTCGCTATTGTAGTAGCTGAGAGCTTAGGCAAGAGTCCTCCAGTAGG
AAGACCAATAATGAAATAA

Upstream 100 bases:

>100_bases
AAGGTAGAGCCCACGTTACTGACATATGTTATATAATGGAATTCTAGGTAATAAATGTTAAGTAGAATACTGTAAGGTAA
TAAACTTTATAAGTATATTA

Downstream 100 bases:

>100_bases
AAAATTATTTACATTTTTTAGCTTGAATCTTATTGTAGTAATTTTTTCATTAATTCATAAAAGTTTTCATAAGGATGAAT
TGCGGTTACTTCTATTGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MLYKDVMTEQKRANPAPLGLSGFALTTLVLSTFNAGLITQGASVVLGLAAFYGGLAQLLAGILEWRAGNTFGYTAFFTYG
AFWEWYFLTAGGFFGGVTPQAIGLVLIAFGIFTLAMWFGTFKANLGLFMTFLLLWITFFLLGVGAMIGNVGLSHAGGYVG
ILTAIAAWYTGLAIVVAESLGKSPPVGRPIMK

Sequences:

>Translated_192_residues
MLYKDVMTEQKRANPAPLGLSGFALTTLVLSTFNAGLITQGASVVLGLAAFYGGLAQLLAGILEWRAGNTFGYTAFFTYG
AFWEWYFLTAGGFFGGVTPQAIGLVLIAFGIFTLAMWFGTFKANLGLFMTFLLLWITFFLLGVGAMIGNVGLSHAGGYVG
ILTAIAAWYTGLAIVVAESLGKSPPVGRPIMK
>Mature_192_residues
MLYKDVMTEQKRANPAPLGLSGFALTTLVLSTFNAGLITQGASVVLGLAAFYGGLAQLLAGILEWRAGNTFGYTAFFTYG
AFWEWYFLTAGGFFGGVTPQAIGLVLIAFGIFTLAMWFGTFKANLGLFMTFLLLWITFFLLGVGAMIGNVGLSHAGGYVG
ILTAIAAWYTGLAIVVAESLGKSPPVGRPIMK

Specific function: Unknown

COG id: COG1584

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GPR1/FUN34/yaaH family [H]

Homologues:

Organism=Escherichia coli, GI1786191, Length=187, Percent_Identity=38.5026737967914, Blast_Score=115, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6324329, Length=176, Percent_Identity=44.3181818181818, Blast_Score=114, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6319855, Length=182, Percent_Identity=43.4065934065934, Blast_Score=95, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6320592, Length=182, Percent_Identity=37.9120879120879, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000791 [H]

Pfam domain/function: PF01184 Grp1_Fun34_YaaH [H]

EC number: NA

Molecular weight: Translated: 20361; Mature: 20361

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS01114 GPR1_FUN34_YAAH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYKDVMTEQKRANPAPLGLSGFALTTLVLSTFNAGLITQGASVVLGLAAFYGGLAQLLA
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHH
GILEWRAGNTFGYTAFFTYGAFWEWYFLTAGGFFGGVTPQAIGLVLIAFGIFTLAMWFGT
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FKANLGLFMTFLLLWITFFLLGVGAMIGNVGLSHAGGYVGILTAIAAWYTGLAIVVAESL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
GKSPPVGRPIMK
CCCCCCCCCCCC
>Mature Secondary Structure
MLYKDVMTEQKRANPAPLGLSGFALTTLVLSTFNAGLITQGASVVLGLAAFYGGLAQLLA
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHH
GILEWRAGNTFGYTAFFTYGAFWEWYFLTAGGFFGGVTPQAIGLVLIAFGIFTLAMWFGT
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FKANLGLFMTFLLLWITFFLLGVGAMIGNVGLSHAGGYVGILTAIAAWYTGLAIVVAESL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
GKSPPVGRPIMK
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]