Click here to switch to the map view.

The map label for this gene is 15899568

Identifier: 15899568

GI number: 15899568

Start: 2613640

End: 2613786

Strand: Reverse

Name: 15899568

Synonym: SSO11307

Alternate gene names: NA

Gene position: 2613786-2613640 (Counterclockwise)

Preceding gene: 15899569

Following gene: 15899566

Centisome position: 87.35

GC content: 45.58

Gene sequence:

>147_bases
GTGAGGAAGTTAACCAACAAGATCTTCCTCTACCTCTATTACACTGTCCTAGATTCAGTGTGGAACCTCGTGAATTACCT
CCTCTTCAACTTCAAGTCCACGAAAAGGAAGCCTCTCTCCTTCGACTCCTTCGTCAGGCTTCTCTAA

Upstream 100 bases:

>100_bases
GAAGGCCAGGATAAGGTACGTTAGTGCTTTCAGAAAGTTTATAGCTTTAGGCAAAGGATATACCACTAGATCATAGTCTA
AGAACTTTTCCAAAATACTA

Downstream 100 bases:

>100_bases
CTTCCTCGGCGTGCAGAGGACACTCTGCACACCGTTCTAACCACGTGATAAAAATTCAGATTATCTCCCTTTAATCTGAA
TCTACACGTTATGTTTATTG

Product: second ORF in transposon ISC1439

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 48; Mature: 48

Protein sequence:

>48_residues
MRKLTNKIFLYLYYTVLDSVWNLVNYLLFNFKSTKRKPLSFDSFVRLL

Sequences:

>Translated_48_residues
MRKLTNKIFLYLYYTVLDSVWNLVNYLLFNFKSTKRKPLSFDSFVRLL
>Mature_48_residues
MRKLTNKIFLYLYYTVLDSVWNLVNYLLFNFKSTKRKPLSFDSFVRLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5910; Mature: 5910

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLTNKIFLYLYYTVLDSVWNLVNYLLFNFKSTKRKPLSFDSFVRLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MRKLTNKIFLYLYYTVLDSVWNLVNYLLFNFKSTKRKPLSFDSFVRLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA