Click here to switch to the map view.

The map label for this gene is ycjP [C]

Identifier: 15899564

GI number: 15899564

Start: 2609154

End: 2610017

Strand: Direct

Name: ycjP [C]

Synonym: SSO2849

Alternate gene names: 15899564

Gene position: 2609154-2610017 (Clockwise)

Preceding gene: 15899563

Following gene: 15899565

Centisome position: 87.2

GC content: 34.14

Gene sequence:

>864_bases
GTGGATAAGAAGATGAGACCAGTGATAAAGGCAAGTTTGCATTATCTAGCATTAGCGATTGTGAGCGTTATATGGCTTAT
ACCAGTTTATGCAATGCTCATAAATGGGTTTAAGAGTAATTTCGAAGTTCTATCTACTCCAGTTTTAGTACCACCTACAA
AAATTACGTTTGAAGCGTATGTGTCAGTCCTTCTATCACTAGCTAAACCTCTAATCAATAGCTTAATAATTGTTATTCCT
ACTTCGTTTATTTCAGCATTCCTAGGTGCTATGGGTGCATATTTCTTTTATACATTATCTTATTCGTTTAGTAGAGCTTC
TTCTGCCATAAGTGATGTTTTATTCTCTCTAATATCACTAGCTACATTTATTCCCCAAGAAGCTACACTATTACCGTTAA
CTAGGCTAATAGTAAGTATGGGATTATTAGATTCTTATATAGGTATAATATTTGCGTTATTGATATTTTATATACCTACT
GGAGCTTTATTAATGTCCATGTTTATTTCAGTTATACCAAGAAGTCTAATTGAGGCGGCAAAGATGGACGGAACTGGAGA
TTTAAAGATATTCATGAAAATAGTATTCCCACTTTCTATGCCAGGCTTCATTTCAACGTTAATATTTATTATAATACAAG
CATGGAATAACTTCTTTATCCCGTTAGTACTAGTGACAACTCCTGGAATGAAACTAACATCTATAGCTGTATTATCCTAT
AGTGGAGCATATGGTACTTTATATAATGATACATTCGCTGCTGGAATGGTTGCAAGTATAATACCACTAGCAATATTTGT
ATTTCTTGGGAGATACTTTATAAGAGGATTAATGGCACTAGGTGGTGGAGGTAAGGGGGTGTAA

Upstream 100 bases:

>100_bases
TCACTGTGGAGTATTTCTCTCAAGCTACAGCAGTTGCTACGATGATAACATTAATTGCTACGATAATCATTATTCCGTAT
GCCTTAACTGTCATTAGGAG

Downstream 100 bases:

>100_bases
AAGATGGTTAGGATTATTGTAAAAAACGTCTCTAAGGTTTTTAAGAAAGGTAAAGTAGTAGCATTAGATAACGTTAATAT
AAATATTGAAAATGGAGAGA

Product: ABC transporter, permease (glucose)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MDKKMRPVIKASLHYLALAIVSVIWLIPVYAMLINGFKSNFEVLSTPVLVPPTKITFEAYVSVLLSLAKPLINSLIIVIP
TSFISAFLGAMGAYFFYTLSYSFSRASSAISDVLFSLISLATFIPQEATLLPLTRLIVSMGLLDSYIGIIFALLIFYIPT
GALLMSMFISVIPRSLIEAAKMDGTGDLKIFMKIVFPLSMPGFISTLIFIIIQAWNNFFIPLVLVTTPGMKLTSIAVLSY
SGAYGTLYNDTFAAGMVASIIPLAIFVFLGRYFIRGLMALGGGGKGV

Sequences:

>Translated_287_residues
MDKKMRPVIKASLHYLALAIVSVIWLIPVYAMLINGFKSNFEVLSTPVLVPPTKITFEAYVSVLLSLAKPLINSLIIVIP
TSFISAFLGAMGAYFFYTLSYSFSRASSAISDVLFSLISLATFIPQEATLLPLTRLIVSMGLLDSYIGIIFALLIFYIPT
GALLMSMFISVIPRSLIEAAKMDGTGDLKIFMKIVFPLSMPGFISTLIFIIIQAWNNFFIPLVLVTTPGMKLTSIAVLSY
SGAYGTLYNDTFAAGMVASIIPLAIFVFLGRYFIRGLMALGGGGKGV
>Mature_287_residues
MDKKMRPVIKASLHYLALAIVSVIWLIPVYAMLINGFKSNFEVLSTPVLVPPTKITFEAYVSVLLSLAKPLINSLIIVIP
TSFISAFLGAMGAYFFYTLSYSFSRASSAISDVLFSLISLATFIPQEATLLPLTRLIVSMGLLDSYIGIIFALLIFYIPT
GALLMSMFISVIPRSLIEAAKMDGTGDLKIFMKIVFPLSMPGFISTLIFIIIQAWNNFFIPLVLVTTPGMKLTSIAVLSY
SGAYGTLYNDTFAAGMVASIIPLAIFVFLGRYFIRGLMALGGGGKGV

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=279, Percent_Identity=27.5985663082437, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1789860, Length=170, Percent_Identity=28.8235294117647, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31182; Mature: 31182

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]