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The map label for this gene is yngC [H]

Identifier: 15899505

GI number: 15899505

Start: 2545152

End: 2545736

Strand: Reverse

Name: yngC [H]

Synonym: SSO2787

Alternate gene names: 15899505

Gene position: 2545736-2545152 (Counterclockwise)

Preceding gene: 15899507

Following gene: 15899504

Centisome position: 85.08

GC content: 32.14

Gene sequence:

>585_bases
ATGGTATATGTATTTCAAGGTATAGGAGGTTACATAATATTGTTTCTCCTCATGATAGGTGAAGGTATAGGGTTACCTTT
ACCTAGTGAGGTTATAATGCCGTTGGTTGGCTATTACTCATATCTAGGCAGTATATCATTATATTTAGGTGTAATAGTTG
GTACATTAGGTAGTTTAGTTGGTTCAATAATAGCTTATATTATAGGTTATAAGCTAGGTCTGGCTTTCCTTAAGAGGTAT
GGGAAGTACATTTTAATAGATGAGGGTAAGATAGAGGCATTGCATAATTGGTTTTTAAGGTATGGTAATATGGCAGTATT
TGGATTTAGGTTTATCCCGGGGTTAAGGGCCTTAATATCATATCCTGCAGGTATAGGGCAAATGAAAATTTTGAAGTTCT
TAGGATTTACATTTTTAGGACATACTATTTGGGATATAGTACTTGCATTAATAGGCTATCAATTGGCCAATCAAATTAAC
TTTGTCATAACCCAAGCAGAGAAATTAGGGAATTATTTATTTATACTTGTAATTGTAATAATCGTAATTTATATTTTATG
GAGAATATTTTGGAAGCGAAAATAA

Upstream 100 bases:

>100_bases
GAGGATTTACGGTAGTGTGAGGAACCTTTGGGACAGAAGTGATCTTAACATCATGACGTCTCGGAAAACTATTTAAGGTA
GAGGGTAAAGCTTACTCATA

Downstream 100 bases:

>100_bases
ATATAAATTATTTGCAATTTATGTCTAACTAAAGCTAGTCTTTAGTATAAAAAATTTTTTATATCTTATCTTATATTTAT
TATCTTATAATGAGGTGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MVYVFQGIGGYIILFLLMIGEGIGLPLPSEVIMPLVGYYSYLGSISLYLGVIVGTLGSLVGSIIAYIIGYKLGLAFLKRY
GKYILIDEGKIEALHNWFLRYGNMAVFGFRFIPGLRALISYPAGIGQMKILKFLGFTFLGHTIWDIVLALIGYQLANQIN
FVITQAEKLGNYLFILVIVIIVIYILWRIFWKRK

Sequences:

>Translated_194_residues
MVYVFQGIGGYIILFLLMIGEGIGLPLPSEVIMPLVGYYSYLGSISLYLGVIVGTLGSLVGSIIAYIIGYKLGLAFLKRY
GKYILIDEGKIEALHNWFLRYGNMAVFGFRFIPGLRALISYPAGIGQMKILKFLGFTFLGHTIWDIVLALIGYQLANQIN
FVITQAEKLGNYLFILVIVIIVIYILWRIFWKRK
>Mature_194_residues
MVYVFQGIGGYIILFLLMIGEGIGLPLPSEVIMPLVGYYSYLGSISLYLGVIVGTLGSLVGSIIAYIIGYKLGLAFLKRY
GKYILIDEGKIEALHNWFLRYGNMAVFGFRFIPGLRALISYPAGIGQMKILKFLGFTFLGHTIWDIVLALIGYQLANQIN
FVITQAEKLGNYLFILVIVIIVIYILWRIFWKRK

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21876; Mature: 21876

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYVFQGIGGYIILFLLMIGEGIGLPLPSEVIMPLVGYYSYLGSISLYLGVIVGTLGSLV
CEEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSIIAYIIGYKLGLAFLKRYGKYILIDEGKIEALHNWFLRYGNMAVFGFRFIPGLRALIS
HHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YPAGIGQMKILKFLGFTFLGHTIWDIVLALIGYQLANQINFVITQAEKLGNYLFILVIVI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVIYILWRIFWKRK
HHHHHHHHHHHCCC
>Mature Secondary Structure
MVYVFQGIGGYIILFLLMIGEGIGLPLPSEVIMPLVGYYSYLGSISLYLGVIVGTLGSLV
CEEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSIIAYIIGYKLGLAFLKRYGKYILIDEGKIEALHNWFLRYGNMAVFGFRFIPGLRALIS
HHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YPAGIGQMKILKFLGFTFLGHTIWDIVLALIGYQLANQINFVITQAEKLGNYLFILVIVI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVIYILWRIFWKRK
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]