Click here to switch to the map view.

The map label for this gene is ydiS [H]

Identifier: 15899491

GI number: 15899491

Start: 2533409

End: 2534632

Strand: Reverse

Name: ydiS [H]

Synonym: SSO2776

Alternate gene names: 15899491

Gene position: 2534632-2533409 (Counterclockwise)

Preceding gene: 15899492

Following gene: 15899490

Centisome position: 84.71

GC content: 37.01

Gene sequence:

>1224_bases
GTGAGCTTCGACGCTGATGTTATAATAGTAGGTGGAGGACTAGCTGGGCTTTCCGCTGCTATTACTGCAAACAGAGAGGG
ATTATCAACTATTGTATTAGAAAGAGGAGAATATTCTGGAAGTAAGAACGTTTCTGGAGGAAGAATGTACACTCACGCAT
TATTACAATTATTTCCCGATGCACTGGAGAGAGCACCATTAGAGAGACCGGTAACTAATGAAACTTACGAGATCTATTGT
GAAGAAGAAAAAAAGATTACTTTTTCGTTCCGGCATAAAACTAGAAATAGCTATACTGTATTGAGGGCTAAATTTGACCA
ATGGCTAGCTAAAGAGGCTGAAAATGAGGGAGTTTTAATATCTTATTCAACACTGGTTACTAATGCTAGGCGGGAAAACG
ATTATGTGGTAATAGAGACTAATAGAGGTGAACTTAAGGCACCTTTAGTTATAGATGCTGGTGGAATTACAGCTCCAGTC
TCCAGATTCTTAGGAGTTAAAAAATTAGAGCCCAAGACGTTAATGTTAGGAGTTAAAGAGGTATTAGACATTAAACCCGA
TATGGATGATGATGAGGGTGAGGCTAGAACCATAGTGGGATTGATAGGAAATTTGAAAGGAGGAGGTTTCGTTTACACTA
ATAAAGATACATTATCCGTAGGCGTTACGATAAAAGTTGAGTCGTTATATAATTCTAATATACCTTCGCATGAAATTGTA
GAGAGATTTAGAGAGTCGTTGGGCTTAAGCGGGAGTATCCTAGAATACTCTGCACACTTGATTCCATATTACGGTTATGA
TAAGATAGGTAAAATCTACGATAAGAATTTAATTTTAGTAGGCGATGCAGCTGGATTTCTAATAAACGACGGATTCAACA
TTAGAGGAATGGATTTAGCAATGGGCTCTGGAATTATTGCTGGAAAGTCAGCTAAGAAGATTAAGGAGCTTAACGATTAT
AGTAGAACTGATATCTATTACGAGATGCTCAAAGAATCTTTCGTACTAAAGGATATGAAGACCGCCTTAAGGTCTTTTAG
CGTATTAAATGAGGAGGAGATTTTCACTAAATATCCTAAGGTCATTTGTAATGTGCTGGGCCAATTGTTTACAGTAACAA
GTGATGGAAAGGAGAGGCCTATAAACGTCTTAATTAAAGAAAGTAAAAGCGAAAACGTAAATACTACGAAAATGCTAACT
GATATCATGAGGTTATTTATATGA

Upstream 100 bases:

>100_bases
TACATAATTAGTAACGGAAATGAAATATTATTAAACATGATAAAAAAAGTAAATATAGGAAAGCCAAACACATATATATG
ACCTTTCAAAATATAATATT

Downstream 100 bases:

>100_bases
TGGATCTTCTGAAAAGGTTGTCTTTAAATAAGTATAATGTAGATAAGACCACCCATATAGAGGTAAATACTGATATATGT
TTAACTTGCAAAGATAAGCC

Product: electron transfert oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSFDADVIIVGGGLAGLSAAITANREGLSTIVLERGEYSGSKNVSGGRMYTHALLQLFPDALERAPLERPVTNETYEIYC
EEEKKITFSFRHKTRNSYTVLRAKFDQWLAKEAENEGVLISYSTLVTNARRENDYVVIETNRGELKAPLVIDAGGITAPV
SRFLGVKKLEPKTLMLGVKEVLDIKPDMDDDEGEARTIVGLIGNLKGGGFVYTNKDTLSVGVTIKVESLYNSNIPSHEIV
ERFRESLGLSGSILEYSAHLIPYYGYDKIGKIYDKNLILVGDAAGFLINDGFNIRGMDLAMGSGIIAGKSAKKIKELNDY
SRTDIYYEMLKESFVLKDMKTALRSFSVLNEEEIFTKYPKVICNVLGQLFTVTSDGKERPINVLIKESKSENVNTTKMLT
DIMRLFI

Sequences:

>Translated_407_residues
MSFDADVIIVGGGLAGLSAAITANREGLSTIVLERGEYSGSKNVSGGRMYTHALLQLFPDALERAPLERPVTNETYEIYC
EEEKKITFSFRHKTRNSYTVLRAKFDQWLAKEAENEGVLISYSTLVTNARRENDYVVIETNRGELKAPLVIDAGGITAPV
SRFLGVKKLEPKTLMLGVKEVLDIKPDMDDDEGEARTIVGLIGNLKGGGFVYTNKDTLSVGVTIKVESLYNSNIPSHEIV
ERFRESLGLSGSILEYSAHLIPYYGYDKIGKIYDKNLILVGDAAGFLINDGFNIRGMDLAMGSGIIAGKSAKKIKELNDY
SRTDIYYEMLKESFVLKDMKTALRSFSVLNEEEIFTKYPKVICNVLGQLFTVTSDGKERPINVLIKESKSENVNTTKMLT
DIMRLFI
>Mature_406_residues
SFDADVIIVGGGLAGLSAAITANREGLSTIVLERGEYSGSKNVSGGRMYTHALLQLFPDALERAPLERPVTNETYEIYCE
EEKKITFSFRHKTRNSYTVLRAKFDQWLAKEAENEGVLISYSTLVTNARRENDYVVIETNRGELKAPLVIDAGGITAPVS
RFLGVKKLEPKTLMLGVKEVLDIKPDMDDDEGEARTIVGLIGNLKGGGFVYTNKDTLSVGVTIKVESLYNSNIPSHEIVE
RFRESLGLSGSILEYSAHLIPYYGYDKIGKIYDKNLILVGDAAGFLINDGFNIRGMDLAMGSGIIAGKSAKKIKELNDYS
RTDIYYEMLKESFVLKDMKTALRSFSVLNEEEIFTKYPKVICNVLGQLFTVTSDGKERPINVLIKESKSENVNTTKMLTD
IMRLFI

Specific function: Probably accepts electrons from ydiQ/ydiR and reduces a quinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF-QO/fixC family [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=385, Percent_Identity=26.2337662337662, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI1787991, Length=403, Percent_Identity=33.7468982630273, Blast_Score=222, Evalue=3e-59,
Organism=Escherichia coli, GI1786227, Length=394, Percent_Identity=32.994923857868, Blast_Score=210, Evalue=2e-55,
Organism=Escherichia coli, GI87082155, Length=403, Percent_Identity=33.0024813895782, Blast_Score=178, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI25144720, Length=383, Percent_Identity=26.8929503916449, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24652256, Length=398, Percent_Identity=27.6381909547739, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.5.5.-

Molecular weight: Translated: 45244; Mature: 45112

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDADVIIVGGGLAGLSAAITANREGLSTIVLERGEYSGSKNVSGGRMYTHALLQLFPD
CCCCCCEEEECCCHHHHHEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
ALERAPLERPVTNETYEIYCEEEKKITFSFRHKTRNSYTVLRAKFDQWLAKEAENEGVLI
HHHHCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCEEEEHHHHHHHHHHHCCCCCEEE
SYSTLVTNARRENDYVVIETNRGELKAPLVIDAGGITAPVSRFLGVKKLEPKTLMLGVKE
EEHHHHHCCCCCCCEEEEECCCCCEECCEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHH
VLDIKPDMDDDEGEARTIVGLIGNLKGGGFVYTNKDTLSVGVTIKVESLYNSNIPSHEIV
HHCCCCCCCCCCCCCEEEEEEHHCCCCCEEEEECCCEEEEEEEEEEEEECCCCCCHHHHH
ERFRESLGLSGSILEYSAHLIPYYGYDKIGKIYDKNLILVGDAAGFLINDGFNIRGMDLA
HHHHHHHCCCCCCEEECCCEEEECCCHHHHHHHCCCEEEEECCCCEEEECCCCEEEEEEE
MGSGIIAGKSAKKIKELNDYSRTDIYYEMLKESFVLKDMKTALRSFSVLNEEEIFTKYPK
CCCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VICNVLGQLFTVTSDGKERPINVLIKESKSENVNTTKMLTDIMRLFI
HHHHHHHHHEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure 
SFDADVIIVGGGLAGLSAAITANREGLSTIVLERGEYSGSKNVSGGRMYTHALLQLFPD
CCCCCEEEECCCHHHHHEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
ALERAPLERPVTNETYEIYCEEEKKITFSFRHKTRNSYTVLRAKFDQWLAKEAENEGVLI
HHHHCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCEEEEHHHHHHHHHHHCCCCCEEE
SYSTLVTNARRENDYVVIETNRGELKAPLVIDAGGITAPVSRFLGVKKLEPKTLMLGVKE
EEHHHHHCCCCCCCEEEEECCCCCEECCEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHH
VLDIKPDMDDDEGEARTIVGLIGNLKGGGFVYTNKDTLSVGVTIKVESLYNSNIPSHEIV
HHCCCCCCCCCCCCCEEEEEEHHCCCCCEEEEECCCEEEEEEEEEEEEECCCCCCHHHHH
ERFRESLGLSGSILEYSAHLIPYYGYDKIGKIYDKNLILVGDAAGFLINDGFNIRGMDLA
HHHHHHHCCCCCCEEECCCEEEECCCHHHHHHHCCCEEEEECCCCEEEECCCCEEEEEEE
MGSGIIAGKSAKKIKELNDYSRTDIYYEMLKESFVLKDMKTALRSFSVLNEEEIFTKYPK
CCCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VICNVLGQLFTVTSDGKERPINVLIKESKSENVNTTKMLTDIMRLFI
HHHHHHHHHEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]