Click here to switch to the map view.

The map label for this gene is 15899449

Identifier: 15899449

GI number: 15899449

Start: 2489184

End: 2489489

Strand: Reverse

Name: 15899449

Synonym: SSO2734

Alternate gene names: NA

Gene position: 2489489-2489184 (Counterclockwise)

Preceding gene: 15899450

Following gene: 15899448

Centisome position: 83.2

GC content: 27.78

Gene sequence:

>306_bases
TTGAATAGAGCTTATATTTTCCTATGTAGTTTCTATTTATTAATGGGAGTTTCAATATCTGACATAAAGTATATCGTAGA
GAGACCTGAGATTTTCGGATTCAAAGTAGAAACTATTAGAAAGGATAACGGATTTAATACTGTTATAAATGACGTCAAAC
AAAATGGTATAAGGATTGACAACTATTGGGTAACATGTAATAAGGATAATGGTGAATGCGAGGTAGTTGACGATAATAGT
AATTCTCTAATAATTGTTAATTTTATAAAGAAAACAATAATCAAGTATGTTACGTCTAAATTATAA

Upstream 100 bases:

>100_bases
GTGTAACCTATGAAATACCTATAAGCGATAATAACATAAAAGTGATAAAAGTTAGTGATAGTATTTATGCATATAACGTT
AATGAATCTCTTTTATCAGA

Downstream 100 bases:

>100_bases
ATATAAGCTTAAAATCCTTTTATTATAAAAGACACTAGTGGAAAACTTCATATCTAGACTAATTGCGTGTGACAAATGCC
CTAGACTCACACAGTATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MNRAYIFLCSFYLLMGVSISDIKYIVERPEIFGFKVETIRKDNGFNTVINDVKQNGIRIDNYWVTCNKDNGECEVVDDNS
NSLIIVNFIKKTIIKYVTSKL

Sequences:

>Translated_101_residues
MNRAYIFLCSFYLLMGVSISDIKYIVERPEIFGFKVETIRKDNGFNTVINDVKQNGIRIDNYWVTCNKDNGECEVVDDNS
NSLIIVNFIKKTIIKYVTSKL
>Mature_101_residues
MNRAYIFLCSFYLLMGVSISDIKYIVERPEIFGFKVETIRKDNGFNTVINDVKQNGIRIDNYWVTCNKDNGECEVVDDNS
NSLIIVNFIKKTIIKYVTSKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11711; Mature: 11711

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS00697 DNA_LIGASE_A1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRAYIFLCSFYLLMGVSISDIKYIVERPEIFGFKVETIRKDNGFNTVINDVKQNGIRID
CCCEEEHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCEEEE
NYWVTCNKDNGECEVVDDNSNSLIIVNFIKKTIIKYVTSKL
EEEEEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRAYIFLCSFYLLMGVSISDIKYIVERPEIFGFKVETIRKDNGFNTVINDVKQNGIRID
CCCEEEHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCEEEE
NYWVTCNKDNGECEVVDDNSNSLIIVNFIKKTIIKYVTSKL
EEEEEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA