Click here to switch to the map view.

The map label for this gene is 15899437

Identifier: 15899437

GI number: 15899437

Start: 2475379

End: 2476134

Strand: Reverse

Name: 15899437

Synonym: SSO2722

Alternate gene names: NA

Gene position: 2476134-2475379 (Counterclockwise)

Preceding gene: 15899438

Following gene: 15899433

Centisome position: 82.75

GC content: 43.65

Gene sequence:

>756_bases
TTGCTATGGAAAGAAAAGGACGTAAGGGGAAAGAAAACAGATTTTTACGACGCAGAAAAACTTGAAAACATGGTAAATAA
GGCTAGAGAATACGTTAACAACCCCTTGAAAGAGTTAGTATCACTCTACCTCTTCATGAATGATGTGCAAACGAAACAAG
AGAACAGGTTAAGGAGAGCTCTCTTCCTCGTGAGCGACGAGGAGAAGTTGAGCGAGGAGAGATTGGAGAAGTTCTCTAAG
GGAGACTTCTCTGACGTAAAACTGTATCAACTGGAATACACTGGTACAGTACTACGTGAGATTCAAGTCCTAGCGAGGAC
ACTACTTCAAACACGAGAAGAGTTGAAGGAGGTGAGGAAAATGATAGAGGGTAATGTGCCTCAAGACCACGTGTTACTCA
CGATTCCCGGAATAGGGAAACTGGCAGCTGGGATTATAATTGGGATTGTGGGTGATATTAAGCGCTTCCCAAGACCTGAA
TCCTTCGTTGCTTATTGCGGTTTAGACCCGGTGGTTGAGAGGAGTGGTAGGATTGAGGTTAGAAAGGGTATCTCCAAGAG
GGGTAACAAGTATTTGGGTAGCTTGTTTTATTTCCTTGCCGAGACTCAATATTCGCGTAACCCTACTCTCCTTAAGTTCC
ACGAAGCTCACAAGGATAAACTGAAGGGTAGGAAACTGTACACTGCCTTAGCTAGGAAGTTGGCTAGGATTGTGTGGAGT
GTTTGGTATAATAATAAACCTTATGAGGTGACGTGA

Upstream 100 bases:

>100_bases
ATGAAGCCAAACATCATCGTAATAGAACCCACCGGAGTATACTCAACGAGACCTTGCCAATACTTCAAAGAAAGAGGAGT
GAAAGTCCTACTAGTCAGCC

Downstream 100 bases:

>100_bases
CCCTCCCCTATCACGCGGATTGAAAGAGTCCGCGTGGCAATAGTAGCTGATACTATGCTCAAAATTCGACCGAAAGATTT
ATTACTGAACGCCTTCACGT

Product: second ORF in transposon ISC1229

Products: NA

Alternate protein names: Second ORF In Transposon ISC; Transposase ISC; Transposon ISC; ORF2 In Transposon ISC

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MLWKEKDVRGKKTDFYDAEKLENMVNKAREYVNNPLKELVSLYLFMNDVQTKQENRLRRALFLVSDEEKLSEERLEKFSK
GDFSDVKLYQLEYTGTVLREIQVLARTLLQTREELKEVRKMIEGNVPQDHVLLTIPGIGKLAAGIIIGIVGDIKRFPRPE
SFVAYCGLDPVVERSGRIEVRKGISKRGNKYLGSLFYFLAETQYSRNPTLLKFHEAHKDKLKGRKLYTALARKLARIVWS
VWYNNKPYEVT

Sequences:

>Translated_251_residues
MLWKEKDVRGKKTDFYDAEKLENMVNKAREYVNNPLKELVSLYLFMNDVQTKQENRLRRALFLVSDEEKLSEERLEKFSK
GDFSDVKLYQLEYTGTVLREIQVLARTLLQTREELKEVRKMIEGNVPQDHVLLTIPGIGKLAAGIIIGIVGDIKRFPRPE
SFVAYCGLDPVVERSGRIEVRKGISKRGNKYLGSLFYFLAETQYSRNPTLLKFHEAHKDKLKGRKLYTALARKLARIVWS
VWYNNKPYEVT
>Mature_251_residues
MLWKEKDVRGKKTDFYDAEKLENMVNKAREYVNNPLKELVSLYLFMNDVQTKQENRLRRALFLVSDEEKLSEERLEKFSK
GDFSDVKLYQLEYTGTVLREIQVLARTLLQTREELKEVRKMIEGNVPQDHVLLTIPGIGKLAAGIIIGIVGDIKRFPRPE
SFVAYCGLDPVVERSGRIEVRKGISKRGNKYLGSLFYFLAETQYSRNPTLLKFHEAHKDKLKGRKLYTALARKLARIVWS
VWYNNKPYEVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29294; Mature: 29294

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWKEKDVRGKKTDFYDAEKLENMVNKAREYVNNPLKELVSLYLFMNDVQTKQENRLRRA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLVSDEEKLSEERLEKFSKGDFSDVKLYQLEYTGTVLREIQVLARTLLQTREELKEVRK
HHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MIEGNVPQDHVLLTIPGIGKLAAGIIIGIVGDIKRFPRPESFVAYCGLDPVVERSGRIEV
HHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHCCCCHHH
RKGISKRGNKYLGSLFYFLAETQYSRNPTLLKFHEAHKDKLKGRKLYTALARKLARIVWS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHH
VWYNNKPYEVT
HHCCCCCCCCC
>Mature Secondary Structure
MLWKEKDVRGKKTDFYDAEKLENMVNKAREYVNNPLKELVSLYLFMNDVQTKQENRLRRA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLVSDEEKLSEERLEKFSKGDFSDVKLYQLEYTGTVLREIQVLARTLLQTREELKEVRK
HHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MIEGNVPQDHVLLTIPGIGKLAAGIIIGIVGDIKRFPRPESFVAYCGLDPVVERSGRIEV
HHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHCCCCHHH
RKGISKRGNKYLGSLFYFLAETQYSRNPTLLKFHEAHKDKLKGRKLYTALARKLARIVWS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHH
VWYNNKPYEVT
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA