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The map label for this gene is yurM [H]

Identifier: 15899430

GI number: 15899430

Start: 2466033

End: 2467679

Strand: Direct

Name: yurM [H]

Synonym: SSO2714

Alternate gene names: 15899430

Gene position: 2466033-2467679 (Clockwise)

Preceding gene: 15899429

Following gene: 15899431

Centisome position: 82.41

GC content: 35.34

Gene sequence:

>1647_bases
ATGATTAAGTATTCTGTCCCTTATTTGGTATATATTGCAGTTTTTGGTATAATACCATTAATTCTAACCTTTGTTATCGT
AGGCATTAATTTCTCAGGTGCAATAAAGTCTTCCTTTAGTGTTGCTCCTCCACCGGAAATAATATATAATACGTTTTTCT
TCTCGTTATTCACAGCGGTGGTATCAACATTATTAGGATATATTCTAGCCATCACAGTTGATATATACCCTAAAAAATTA
CTAATTCTTTTAATATTACTACCATTTACAATACCATTTACGGCATCAGCATTGATATGGGTTATAAGTTTTTACGGAGG
TTATGGATGGTTCACATACTTTTTGGGTATAAATTATGATCCATTATACTTTTCCAAAAGTGCATTATTTGCGGTAAGTC
TAGTAAGTGCGTGGAGTTCTGTCCCCTTAGCCTTCCTTTTAATTTTGGCATCATTAAAGAGTATTCCAAAGGAGATCAAA
GAGTCTTCTCAGATAGACGGTTTAACATTATCTCAGTATTATTTTAAAGTAGCATTTCCGTACTCATTAAAGGGGATCCT
ATTAGCCTTTTTGATAACCTTTGTCCTATCCATGGGTAACTTTGATTTACCTTATGTTATGACTCAAGGAGGTCCTGGGT
TCTCTACAACAACATTACCTCTAATTGTATATTTTATGATGTTTCAGTACGATAACTTTTCCGGTGGAGCACTTTTCGCG
TCTATTTTAGCGTTAATAGCTTCGATACCGGCAATCGGTGTAGCGTTATTAGTGAAAAGCAAGGGCTTCAGATTTTCTCT
TCCAGCAATAAAAATTCCGGATAAAATATTTAAAATAATAGCGTTACTGATTTCTTTAATTATTATAATATTCTTAGACT
TTCCTGTATATTGGATGGTATTAGTAGCTACCAGACCAAATACCTTAGATTTCTTAAAACCTCCAGTTTTAATTCCCAAG
GAGTTTACTCTTTCATACCTAGTTTCGTCCTTAGAATCATCTGTTCCATACATTATATCTTCCATTATTGTATCATTAAT
CGTAGGTGTCCTTACAATACTTCTATCTAGTCTAGGAGCTTATGAGGGAGCAAGAAAGTTCTGGTTCTGGTTATTATTGT
TATCAATTTACCTCTATGCCTTACCATCGACCTCTTACATTATTCCAGTATATTTAATGACGTCTGATTTACATTTAATA
AACACTTGGATAGGACTGGCATTACCTTCGGCAATATTCACCGCCTCATTTGCCTTTTGGACGATGTTTAACTTTTACAT
AGATTTTCCAAAAGTGTACGAGGAAGCCGCTGAAATTGACGGCATGAAGAACAAAATACTAAAATTAATATTGCCGCTCT
CAAGACCATTTCTAATTGCGACGTTTGTAATATCATTTACATTTGCATGGCACCTTCTATTCTATCCTTTAGTTCTGAGT
GAGACTCCCTATCAAATGAACTTTCCACCAACTGGGAGTGAGACTGCAACAATTTTCGCTCTAAATGCCATAAGTCAAGG
GTCAGTTAATTGGGCCTTATTAGCCTCATCAGCTCTAGTAGCATCATTACCTGTCGTAATAGTATCATATGTGGCGCAAG
ATTACATGTTAAGGGGCTTATACTCTGGTGGTGTTAAGGGAGCATGA

Upstream 100 bases:

>100_bases
ATAGATTTCATCGATAATGAAGTTAAAGCTATAAGTAAGGAAAGGATTAAGGAGGGTTCTAAGGTTAAATTCGACTTCAT
TAGTTATAAGGTGTTTAGTA

Downstream 100 bases:

>100_bases
TAATTGATCAACTCGTTAACAATTACCGGGTTTACCGTTTATTAAGCAAACTTTTTAAGGTCTAATGTACCAGTTTTAGA
CACGATGAATACTAACTCTA

Product: ABC transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MIKYSVPYLVYIAVFGIIPLILTFVIVGINFSGAIKSSFSVAPPPEIIYNTFFFSLFTAVVSTLLGYILAITVDIYPKKL
LILLILLPFTIPFTASALIWVISFYGGYGWFTYFLGINYDPLYFSKSALFAVSLVSAWSSVPLAFLLILASLKSIPKEIK
ESSQIDGLTLSQYYFKVAFPYSLKGILLAFLITFVLSMGNFDLPYVMTQGGPGFSTTTLPLIVYFMMFQYDNFSGGALFA
SILALIASIPAIGVALLVKSKGFRFSLPAIKIPDKIFKIIALLISLIIIIFLDFPVYWMVLVATRPNTLDFLKPPVLIPK
EFTLSYLVSSLESSVPYIISSIIVSLIVGVLTILLSSLGAYEGARKFWFWLLLLSIYLYALPSTSYIIPVYLMTSDLHLI
NTWIGLALPSAIFTASFAFWTMFNFYIDFPKVYEEAAEIDGMKNKILKLILPLSRPFLIATFVISFTFAWHLLFYPLVLS
ETPYQMNFPPTGSETATIFALNAISQGSVNWALLASSALVASLPVVIVSYVAQDYMLRGLYSGGVKGA

Sequences:

>Translated_548_residues
MIKYSVPYLVYIAVFGIIPLILTFVIVGINFSGAIKSSFSVAPPPEIIYNTFFFSLFTAVVSTLLGYILAITVDIYPKKL
LILLILLPFTIPFTASALIWVISFYGGYGWFTYFLGINYDPLYFSKSALFAVSLVSAWSSVPLAFLLILASLKSIPKEIK
ESSQIDGLTLSQYYFKVAFPYSLKGILLAFLITFVLSMGNFDLPYVMTQGGPGFSTTTLPLIVYFMMFQYDNFSGGALFA
SILALIASIPAIGVALLVKSKGFRFSLPAIKIPDKIFKIIALLISLIIIIFLDFPVYWMVLVATRPNTLDFLKPPVLIPK
EFTLSYLVSSLESSVPYIISSIIVSLIVGVLTILLSSLGAYEGARKFWFWLLLLSIYLYALPSTSYIIPVYLMTSDLHLI
NTWIGLALPSAIFTASFAFWTMFNFYIDFPKVYEEAAEIDGMKNKILKLILPLSRPFLIATFVISFTFAWHLLFYPLVLS
ETPYQMNFPPTGSETATIFALNAISQGSVNWALLASSALVASLPVVIVSYVAQDYMLRGLYSGGVKGA
>Mature_548_residues
MIKYSVPYLVYIAVFGIIPLILTFVIVGINFSGAIKSSFSVAPPPEIIYNTFFFSLFTAVVSTLLGYILAITVDIYPKKL
LILLILLPFTIPFTASALIWVISFYGGYGWFTYFLGINYDPLYFSKSALFAVSLVSAWSSVPLAFLLILASLKSIPKEIK
ESSQIDGLTLSQYYFKVAFPYSLKGILLAFLITFVLSMGNFDLPYVMTQGGPGFSTTTLPLIVYFMMFQYDNFSGGALFA
SILALIASIPAIGVALLVKSKGFRFSLPAIKIPDKIFKIIALLISLIIIIFLDFPVYWMVLVATRPNTLDFLKPPVLIPK
EFTLSYLVSSLESSVPYIISSIIVSLIVGVLTILLSSLGAYEGARKFWFWLLLLSIYLYALPSTSYIIPVYLMTSDLHLI
NTWIGLALPSAIFTASFAFWTMFNFYIDFPKVYEEAAEIDGMKNKILKLILPLSRPFLIATFVISFTFAWHLLFYPLVLS
ETPYQMNFPPTGSETATIFALNAISQGSVNWALLASSALVASLPVVIVSYVAQDYMLRGLYSGGVKGA

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=282, Percent_Identity=25.531914893617, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787571, Length=284, Percent_Identity=29.5774647887324, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789861, Length=184, Percent_Identity=31.5217391304348, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790465, Length=177, Percent_Identity=29.3785310734463, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 60760; Mature: 60760

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKYSVPYLVYIAVFGIIPLILTFVIVGINFSGAIKSSFSVAPPPEIIYNTFFFSLFTAV
CCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHH
VSTLLGYILAITVDIYPKKLLILLILLPFTIPFTASALIWVISFYGGYGWFTYFLGINYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCC
PLYFSKSALFAVSLVSAWSSVPLAFLLILASLKSIPKEIKESSQIDGLTLSQYYFKVAFP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHEEEECC
YSLKGILLAFLITFVLSMGNFDLPYVMTQGGPGFSTTTLPLIVYFMMFQYDNFSGGALFA
CHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
SILALIASIPAIGVALLVKSKGFRFSLPAIKIPDKIFKIIALLISLIIIIFLDFPVYWMV
HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVATRPNTLDFLKPPVLIPKEFTLSYLVSSLESSVPYIISSIIVSLIVGVLTILLSSLGA
HHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
YEGARKFWFWLLLLSIYLYALPSTSYIIPVYLMTSDLHLINTWIGLALPSAIFTASFAFW
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
TMFNFYIDFPKVYEEAAEIDGMKNKILKLILPLSRPFLIATFVISFTFAWHLLFYPLVLS
HHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
ETPYQMNFPPTGSETATIFALNAISQGSVNWALLASSALVASLPVVIVSYVAQDYMLRGL
CCCCEECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSGGVKGA
HCCCCCCC
>Mature Secondary Structure
MIKYSVPYLVYIAVFGIIPLILTFVIVGINFSGAIKSSFSVAPPPEIIYNTFFFSLFTAV
CCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHH
VSTLLGYILAITVDIYPKKLLILLILLPFTIPFTASALIWVISFYGGYGWFTYFLGINYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCC
PLYFSKSALFAVSLVSAWSSVPLAFLLILASLKSIPKEIKESSQIDGLTLSQYYFKVAFP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHEEEECC
YSLKGILLAFLITFVLSMGNFDLPYVMTQGGPGFSTTTLPLIVYFMMFQYDNFSGGALFA
CHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
SILALIASIPAIGVALLVKSKGFRFSLPAIKIPDKIFKIIALLISLIIIIFLDFPVYWMV
HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVATRPNTLDFLKPPVLIPKEFTLSYLVSSLESSVPYIISSIIVSLIVGVLTILLSSLGA
HHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
YEGARKFWFWLLLLSIYLYALPSTSYIIPVYLMTSDLHLINTWIGLALPSAIFTASFAFW
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
TMFNFYIDFPKVYEEAAEIDGMKNKILKLILPLSRPFLIATFVISFTFAWHLLFYPLVLS
HHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
ETPYQMNFPPTGSETATIFALNAISQGSVNWALLASSALVASLPVVIVSYVAQDYMLRGL
CCCCEECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSGGVKGA
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]