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The map label for this gene is soxA [H]

Identifier: 15899381

GI number: 15899381

Start: 2416772

End: 2417281

Strand: Reverse

Name: soxA [H]

Synonym: SSO2658

Alternate gene names: 15899381

Gene position: 2417281-2416772 (Counterclockwise)

Preceding gene: 15899382

Following gene: 15899380

Centisome position: 80.78

GC content: 37.06

Gene sequence:

>510_bases
ATGGATATTAAGGAACACGCTGAAGAAGTGTGGTTTATAATTATGTTGATCTTGGTTGCAACATTCTTCAGTTGGAATGT
CTATTACATTTTGACTGGAAAGAGCTTTAGTTTAAGATACGGTTTACCAGAGTTTTCAGGATTACCTCCACAAGCTCAAG
AAATAGTAAAGTATTTCGAAGCTCACCCACCACCTTCTGGTGAGTACTCTGAAGTTATAAACGGTACACTAGTAGTAAAT
CTCACTGCAGTGCAATACAGATGGATTCCCAACGTTATCATAGCTAATGTAAGTGAACCAGTAGTATTAATAATAAATTC
CCCTCAAGTAGATACTGGATTCTACCTAAGACTTCCAAATGGATTAATTAACGTTAATAATGTGCCTGGAATTACAAGTT
ACGTTTATTTCGTAACTCCCAATCAGCCAGGGAATTACACATGGTATAATGCGGAATATGATGGCTACTCTTCATCATAC
ATGACTGGAACTTTGGAGGTGGTATCATGA

Upstream 100 bases:

>100_bases
TTAACTCAACTTTAACAGAGTTTAAGTTATTAAATCTTCGAAAGATTTCAAATAAAGATTTATAAGCCTCAATACTCTAA
AAAAGAATTAGGTGTAAAGT

Downstream 100 bases:

>100_bases
GCCAACTTTTAAATCAGATAAAGGATACTGTTATCCCTAAAAATACGTTAAACGTAGTTTGGCTTTACACTATAGGTTCT
ATATTCTGGCTAGGAGTTCT

Product: quinol oxidase (SoxABC), subunit II (soxA)

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Oxidase aa(3) subunit 2; Quinol oxidase polypeptide II [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MDIKEHAEEVWFIIMLILVATFFSWNVYYILTGKSFSLRYGLPEFSGLPPQAQEIVKYFEAHPPPSGEYSEVINGTLVVN
LTAVQYRWIPNVIIANVSEPVVLIINSPQVDTGFYLRLPNGLINVNNVPGITSYVYFVTPNQPGNYTWYNAEYDGYSSSY
MTGTLEVVS

Sequences:

>Translated_169_residues
MDIKEHAEEVWFIIMLILVATFFSWNVYYILTGKSFSLRYGLPEFSGLPPQAQEIVKYFEAHPPPSGEYSEVINGTLVVN
LTAVQYRWIPNVIIANVSEPVVLIINSPQVDTGFYLRLPNGLINVNNVPGITSYVYFVTPNQPGNYTWYNAEYDGYSSSY
MTGTLEVVS
>Mature_169_residues
MDIKEHAEEVWFIIMLILVATFFSWNVYYILTGKSFSLRYGLPEFSGLPPQAQEIVKYFEAHPPPSGEYSEVINGTLVVN
LTAVQYRWIPNVIIANVSEPVVLIINSPQVDTGFYLRLPNGLINVNNVPGITSYVYFVTPNQPGNYTWYNAEYDGYSSSY
MTGTLEVVS

Specific function: Subunit 2 transfers the electrons from caldariella quinol to the bimetallic center of the catalytic subunit 1 that is formed by heme A3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008972
- InterPro:   IPR002429 [H]

Pfam domain/function: PF00116 COX2 [H]

EC number: 1.9.3.-

Molecular weight: Translated: 19105; Mature: 19105

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKEHAEEVWFIIMLILVATFFSWNVYYILTGKSFSLRYGLPEFSGLPPQAQEIVKYFE
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHH
AHPPPSGEYSEVINGTLVVNLTAVQYRWIPNVIIANVSEPVVLIINSPQVDTGFYLRLPN
CCCCCCCCHHHHCCCEEEEEEEEEEEEECCCEEEECCCCCEEEEECCCCCCCCEEEECCC
GLINVNNVPGITSYVYFVTPNQPGNYTWYNAEYDGYSSSYMTGTLEVVS
CEEEECCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MDIKEHAEEVWFIIMLILVATFFSWNVYYILTGKSFSLRYGLPEFSGLPPQAQEIVKYFE
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHH
AHPPPSGEYSEVINGTLVVNLTAVQYRWIPNVIIANVSEPVVLIINSPQVDTGFYLRLPN
CCCCCCCCHHHHCCCEEEEEEEEEEEEECCCEEEECCCCCEEEEECCCCCCCCEEEECCC
GLINVNNVPGITSYVYFVTPNQPGNYTWYNAEYDGYSSSYMTGTLEVVS
CEEEECCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1372250 [H]