Click here to switch to the map view.

The map label for this gene is 15899277

Identifier: 15899277

GI number: 15899277

Start: 2313547

End: 2313840

Strand: Reverse

Name: 15899277

Synonym: SSO10604

Alternate gene names: NA

Gene position: 2313840-2313547 (Counterclockwise)

Preceding gene: 15899278

Following gene: 15899275

Centisome position: 77.33

GC content: 43.54

Gene sequence:

>294_bases
ATGGGAAAGAGTAAGTACAAGAGGGACTGGAGCAAGTACGACGAGAACGTCATTACTAGATATAAGTTGATGTTCCCCTT
CTACGTATTCGAACATTGGTGGGACTTATTAGCAGAGGAGAACAGGAACGCTAGGACAAAGTATAAAGCTCCGAAGGAGT
TCAACGACTTCCTAGCCTTCCTCCACATCTTCCTACCTTACAGAGCAATAGAAGGAGTATTAAGAGCCTTAGAACAATTG
AAGATCATCCCCACAAGCCTCGATTACTCAAGAGAGTGTCCAAAGCGCAAATAA

Upstream 100 bases:

>100_bases
CTACATTATAGTTCTATATAAATCTTTCTTTACACCATGCTTTGTGGATTGCTTCAGAATTGTACAAAAAGTTTATAAAT
TATTCGTTTAAGTATTACCT

Downstream 100 bases:

>100_bases
TTGAATAAATCTATGTAACGATTTATAGATAATTATTCAGAAAATGAGATGAGTTATTGAGAAATTTTGAATTTTCTCTT
GAAGCTAAAAGGGAAGTAAT

Product: partial transposase ISC1058

Products: NA

Alternate protein names: ORF1 In Transposon ISC; Transposase IS4 Family Protein; Transposon

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MGKSKYKRDWSKYDENVITRYKLMFPFYVFEHWWDLLAEENRNARTKYKAPKEFNDFLAFLHIFLPYRAIEGVLRALEQL
KIIPTSLDYSRECPKRK

Sequences:

>Translated_97_residues
MGKSKYKRDWSKYDENVITRYKLMFPFYVFEHWWDLLAEENRNARTKYKAPKEFNDFLAFLHIFLPYRAIEGVLRALEQL
KIIPTSLDYSRECPKRK
>Mature_96_residues
GKSKYKRDWSKYDENVITRYKLMFPFYVFEHWWDLLAEENRNARTKYKAPKEFNDFLAFLHIFLPYRAIEGVLRALEQLK
IIPTSLDYSRECPKRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11914; Mature: 11783

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKSKYKRDWSKYDENVITRYKLMFPFYVFEHWWDLLAEENRNARTKYKAPKEFNDFLAF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
LHIFLPYRAIEGVLRALEQLKIIPTSLDYSRECPKRK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GKSKYKRDWSKYDENVITRYKLMFPFYVFEHWWDLLAEENRNARTKYKAPKEFNDFLAF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
LHIFLPYRAIEGVLRALEQLKIIPTSLDYSRECPKRK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA