| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is paaF-5 [H]
Identifier: 15899269
GI number: 15899269
Start: 2302377
End: 2303117
Strand: Direct
Name: paaF-5 [H]
Synonym: SSO2535
Alternate gene names: 15899269
Gene position: 2302377-2303117 (Clockwise)
Preceding gene: 15899267
Following gene: 15899270
Centisome position: 76.94
GC content: 37.25
Gene sequence:
>741_bases ATGACAAAAATCCTTTTGGAGAAGAGAAAAGACGTTTGTTGGATAACATTGAATAGACCTGAAAAGTTAAATGCGTTAGA TAAGGAAAGCTGGAGTCTTTTAGCGAATCATTTAGGAGAATGTAACAATGATCAGTCAATTTCAGCGATAGTCTTAACAG GTAATGGAAGAGCTTTCTCTGCGGGAGATGACATAAACGCGATGTTAGAACTAAAAGATCAAAAGGATGCTCTAGATTTC TTCAACACATTATATAGCGCAGTGGAAAGCTTAGTGGATTTGAAAAAGCCACTAGTTTGTGCTGTTAACGGACTAGCTTA TGGTGGTGGATGCGAGATACTCCTTTTCTGTGATATCGTAATTGCAGTTAAAGATGCTACTTTTTCCATTCCAGAGGGAA GGTTAGGATTAATTCCTCCAATCGCAATATCCTTGGGTTATTTAATTTTGGGTAGGTCAATTGCCAGGTTAGCATTGACT GGAGATTCTATAACTGCTGAAGAGGCTAAGATGATTGGACTGGTGGATATTGTTGTTGCAAATGAAGACCTCCTCACAGA AGTTGAGAGACAATTGGAAAAAATTAAAAGTATTGATAGGAGTTCTATTCTAACAATAAAAAATTGGTTAAGAGATGATA AGGAGAAGATAAGGAAGGCGGTTATGGAATTAGCGTTGATGGCGTTGGGTAATTCCGCAAAAGAGAAAATGAAGGAATTC ATGAACAGAAAACGATCATAA
Upstream 100 bases:
>100_bases ACAAAACTACGATAATTTTTTTATCTTAAATTTTGGGACTTTATCATGATTAATTTATAAGACCAACAATGCTTAAGATA TCCCTTGAAATATTAGATTT
Downstream 100 bases:
>100_bases TAGTGGTTGCCATTGCCTTTGTCTATATAAATCTTAATATCATAATACTCTAGACAATTGTCAGTAATGCTATTACGTTA TATAACATTATAATATTTAA
Product: enoyl CoA hydratase (paaF-5)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTKILLEKRKDVCWITLNRPEKLNALDKESWSLLANHLGECNNDQSISAIVLTGNGRAFSAGDDINAMLELKDQKDALDF FNTLYSAVESLVDLKKPLVCAVNGLAYGGGCEILLFCDIVIAVKDATFSIPEGRLGLIPPIAISLGYLILGRSIARLALT GDSITAEEAKMIGLVDIVVANEDLLTEVERQLEKIKSIDRSSILTIKNWLRDDKEKIRKAVMELALMALGNSAKEKMKEF MNRKRS
Sequences:
>Translated_246_residues MTKILLEKRKDVCWITLNRPEKLNALDKESWSLLANHLGECNNDQSISAIVLTGNGRAFSAGDDINAMLELKDQKDALDF FNTLYSAVESLVDLKKPLVCAVNGLAYGGGCEILLFCDIVIAVKDATFSIPEGRLGLIPPIAISLGYLILGRSIARLALT GDSITAEEAKMIGLVDIVVANEDLLTEVERQLEKIKSIDRSSILTIKNWLRDDKEKIRKAVMELALMALGNSAKEKMKEF MNRKRS >Mature_245_residues TKILLEKRKDVCWITLNRPEKLNALDKESWSLLANHLGECNNDQSISAIVLTGNGRAFSAGDDINAMLELKDQKDALDFF NTLYSAVESLVDLKKPLVCAVNGLAYGGGCEILLFCDIVIAVKDATFSIPEGRLGLIPPIAISLGYLILGRSIARLALTG DSITAEEAKMIGLVDIVVANEDLLTEVERQLEKIKSIDRSSILTIKNWLRDDKEKIRKAVMELALMALGNSAKEKMKEFM NRKRS
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=200, Percent_Identity=39.5, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI31542718, Length=194, Percent_Identity=27.319587628866, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI37594469, Length=219, Percent_Identity=29.6803652968037, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI37594471, Length=219, Percent_Identity=29.6803652968037, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI260274832, Length=210, Percent_Identity=30.952380952381, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI45643119, Length=210, Percent_Identity=30.952380952381, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI260275230, Length=210, Percent_Identity=30.952380952381, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI20127408, Length=214, Percent_Identity=31.3084112149533, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI70995211, Length=193, Percent_Identity=28.4974093264249, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI4757968, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI49355787, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI4757966, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI51538581, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI68989263, Length=157, Percent_Identity=34.3949044585987, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI25453481, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI51538573, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1787659, Length=222, Percent_Identity=39.1891891891892, Blast_Score=125, Evalue=2e-30, Organism=Escherichia coli, GI221142681, Length=213, Percent_Identity=29.1079812206573, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1787660, Length=206, Percent_Identity=37.8640776699029, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI1790281, Length=205, Percent_Identity=28.780487804878, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI87082183, Length=252, Percent_Identity=27.3809523809524, Blast_Score=65, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17554946, Length=221, Percent_Identity=36.6515837104072, Blast_Score=121, Evalue=4e-28, Organism=Caenorhabditis elegans, GI25145438, Length=182, Percent_Identity=40.6593406593407, Blast_Score=114, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17535521, Length=215, Percent_Identity=32.093023255814, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17549921, Length=205, Percent_Identity=32.1951219512195, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI25144157, Length=211, Percent_Identity=29.3838862559242, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI25144160, Length=211, Percent_Identity=29.3838862559242, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17560910, Length=180, Percent_Identity=31.1111111111111, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17558304, Length=183, Percent_Identity=33.879781420765, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25141363, Length=180, Percent_Identity=31.1111111111111, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17540306, Length=189, Percent_Identity=27.5132275132275, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17536985, Length=197, Percent_Identity=27.9187817258883, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17540714, Length=207, Percent_Identity=28.0193236714976, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17534483, Length=191, Percent_Identity=25.130890052356, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320241, Length=182, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=6e-16, Organism=Drosophila melanogaster, GI20129971, Length=189, Percent_Identity=40.7407407407407, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI24653477, Length=189, Percent_Identity=40.7407407407407, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI19922422, Length=204, Percent_Identity=29.9019607843137, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24654903, Length=216, Percent_Identity=27.3148148148148, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI24650670, Length=230, Percent_Identity=27.8260869565217, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI21357171, Length=180, Percent_Identity=31.1111111111111, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28571729, Length=145, Percent_Identity=31.0344827586207, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI28571730, Length=145, Percent_Identity=31.0344827586207, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI19920382, Length=214, Percent_Identity=27.5700934579439, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24583165, Length=186, Percent_Identity=29.0322580645161, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24653139, Length=189, Percent_Identity=30.6878306878307, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI19921018, Length=185, Percent_Identity=26.4864864864865, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 27182; Mature: 27051
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKILLEKRKDVCWITLNRPEKLNALDKESWSLLANHLGECNNDQSISAIVLTGNGRAFS CCCHHHHCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEC AGDDINAMLELKDQKDALDFFNTLYSAVESLVDLKKPLVCAVNGLAYGGGCEILLFCDIV CCCCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEECCCCHHHHHHHHH IAVKDATFSIPEGRLGLIPPIAISLGYLILGRSIARLALTGDSITAEEAKMIGLVDIVVA HHEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHEEEEEC NEDLLTEVERQLEKIKSIDRSSILTIKNWLRDDKEKIRKAVMELALMALGNSAKEKMKEF CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH MNRKRS HHHCCC >Mature Secondary Structure TKILLEKRKDVCWITLNRPEKLNALDKESWSLLANHLGECNNDQSISAIVLTGNGRAFS CCHHHHCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEC AGDDINAMLELKDQKDALDFFNTLYSAVESLVDLKKPLVCAVNGLAYGGGCEILLFCDIV CCCCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEECCCCHHHHHHHHH IAVKDATFSIPEGRLGLIPPIAISLGYLILGRSIARLALTGDSITAEEAKMIGLVDIVVA HHEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHEEEEEC NEDLLTEVERQLEKIKSIDRSSILTIKNWLRDDKEKIRKAVMELALMALGNSAKEKMKEF CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH MNRKRS HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]