Click here to switch to the map view.

The map label for this gene is vdlD [H]

Identifier: 15899054

GI number: 15899054

Start: 2096761

End: 2097717

Strand: Direct

Name: vdlD [H]

Synonym: SSO2287

Alternate gene names: 15899054

Gene position: 2096761-2097717 (Clockwise)

Preceding gene: 15899053

Following gene: 15899056

Centisome position: 70.07

GC content: 35.53

Gene sequence:

>957_bases
ATGTCATACTTGAAAATCTCTGATACTATTGTTGAAACATTTAGATTTATCCATTATGAACAGTCTAATTTTTTAAATAG
GCTACATGGAGGTGATATGCTATTCTTCCTAGTGGAGACTGGTATGATATCTGCTTCAAAAGTTGCCATGGGTACTACGC
TCTTAGCCTCGTTAGACGATGTTGTATTTAAGAAACCAGTTAGATTAGGTGATATAGTTAAAGTAAGGGCTAAGACGGTG
TATATAGGTAATACATCCTTGGAAGTTGAAGTTAGAGCGTTTGTTAGAGATGAAGAAGTAGTTTCAGCTTATGCTACGTA
TGTTAAAGTTGATGATCTATTAAGGCCCACTCCAGTTAACGTGAAGATTATGGCAGAGAGTGAAGATGATAAGAGGAAAA
TAGATGAGGCAAAGAAGAGAAGAGAAAATAGATTATCTAAAATAGTAAATAGACAGAAGATGAGATTTTATGTTGATGAT
ATTACTGATGGATTAAGATATAGGATAAGTAATGTGATTCATGTATCTCCCGAGCTGACATATGATGGAAGAATAATGTC
TGCTGGTAAATTACTGAAACTTATGGATGATCTTGGAGGAATAATCTGCTTACGCTATTTAGATCATAACAGTAGTAATC
TTTATGACAATTCTTTTAACGCCGTAGTTACAGTAGCAGTTAAGGGACTAGCATTTTACTCTCCAATAAGGCTTAATGAT
ATAATCCTAATTAGAGCCGGACTGGTTTATGTAGGTAATACCTCTGCTGATATTTTAATAAACGTGGTTAGGGAAGATCT
GAACGGTGCAAAGGAACATGTAGCTACTGCGTACTTTACATATGTTAGAGTGGATAAGGATGGTAAACCTATAAAAATAC
CAGAATATACGCCCGTTACAGAAAGAGAAAAAAGGCTTTATGAGGAGGCACTAACTCGTCGAGGTCTGCGTAAATAG

Upstream 100 bases:

>100_bases
AACCTTGATTGGAAAGGAATTTTAAGGCAACTAAGGGATATTGCCTTGGAGTACGCAAAAAGAGATAAAAGTTTTGACAA
GATAGCTGATATGGTTAATA

Downstream 100 bases:

>100_bases
AAATACAATAGGAATAACGAAAGCGCGAAAGAATAGAAGGAAATTTGGTAGCTTGACACTATATTATTGGTAGAACCTGA
TAAGAATCCTCCAACAACAT

Product: acyl-coenzyme a thioester hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSYLKISDTIVETFRFIHYEQSNFLNRLHGGDMLFFLVETGMISASKVAMGTTLLASLDDVVFKKPVRLGDIVKVRAKTV
YIGNTSLEVEVRAFVRDEEVVSAYATYVKVDDLLRPTPVNVKIMAESEDDKRKIDEAKKRRENRLSKIVNRQKMRFYVDD
ITDGLRYRISNVIHVSPELTYDGRIMSAGKLLKLMDDLGGIICLRYLDHNSSNLYDNSFNAVVTVAVKGLAFYSPIRLND
IILIRAGLVYVGNTSADILINVVREDLNGAKEHVATAYFTYVRVDKDGKPIKIPEYTPVTEREKRLYEEALTRRGLRK

Sequences:

>Translated_318_residues
MSYLKISDTIVETFRFIHYEQSNFLNRLHGGDMLFFLVETGMISASKVAMGTTLLASLDDVVFKKPVRLGDIVKVRAKTV
YIGNTSLEVEVRAFVRDEEVVSAYATYVKVDDLLRPTPVNVKIMAESEDDKRKIDEAKKRRENRLSKIVNRQKMRFYVDD
ITDGLRYRISNVIHVSPELTYDGRIMSAGKLLKLMDDLGGIICLRYLDHNSSNLYDNSFNAVVTVAVKGLAFYSPIRLND
IILIRAGLVYVGNTSADILINVVREDLNGAKEHVATAYFTYVRVDKDGKPIKIPEYTPVTEREKRLYEEALTRRGLRK
>Mature_317_residues
SYLKISDTIVETFRFIHYEQSNFLNRLHGGDMLFFLVETGMISASKVAMGTTLLASLDDVVFKKPVRLGDIVKVRAKTVY
IGNTSLEVEVRAFVRDEEVVSAYATYVKVDDLLRPTPVNVKIMAESEDDKRKIDEAKKRRENRLSKIVNRQKMRFYVDDI
TDGLRYRISNVIHVSPELTYDGRIMSAGKLLKLMDDLGGIICLRYLDHNSSNLYDNSFNAVVTVAVKGLAFYSPIRLNDI
ILIRAGLVYVGNTSADILINVVREDLNGAKEHVATAYFTYVRVDKDGKPIKIPEYTPVTEREKRLYEEALTRRGLRK

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI75709208, Length=331, Percent_Identity=26.5861027190332, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI32528282, Length=325, Percent_Identity=27.3846153846154, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI32528286, Length=323, Percent_Identity=27.2445820433437, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI32528284, Length=316, Percent_Identity=27.5316455696203, Blast_Score=96, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 36244; Mature: 36113

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYLKISDTIVETFRFIHYEQSNFLNRLHGGDMLFFLVETGMISASKVAMGTTLLASLDD
CCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH
VVFKKPVRLGDIVKVRAKTVYIGNTSLEVEVRAFVRDEEVVSAYATYVKVDDLLRPTPVN
HHHHCCCCCCCEEEEEEEEEEECCCEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCC
VKIMAESEDDKRKIDEAKKRRENRLSKIVNRQKMRFYVDDITDGLRYRISNVIHVSPELT
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCEEEECCCCE
YDGRIMSAGKLLKLMDDLGGIICLRYLDHNSSNLYDNSFNAVVTVAVKGLAFYSPIRLND
ECCEEECHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCE
IILIRAGLVYVGNTSADILINVVREDLNGAKEHVATAYFTYVRVDKDGKPIKIPEYTPVT
EEEEEECEEEECCCCHHHHHHHHHHHHCHHHHHHHEEEEEEEEECCCCCCEECCCCCCCC
EREKRLYEEALTRRGLRK
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SYLKISDTIVETFRFIHYEQSNFLNRLHGGDMLFFLVETGMISASKVAMGTTLLASLDD
CEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH
VVFKKPVRLGDIVKVRAKTVYIGNTSLEVEVRAFVRDEEVVSAYATYVKVDDLLRPTPVN
HHHHCCCCCCCEEEEEEEEEEECCCEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCC
VKIMAESEDDKRKIDEAKKRRENRLSKIVNRQKMRFYVDDITDGLRYRISNVIHVSPELT
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCEEEECCCCE
YDGRIMSAGKLLKLMDDLGGIICLRYLDHNSSNLYDNSFNAVVTVAVKGLAFYSPIRLND
ECCEEECHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCE
IILIRAGLVYVGNTSADILINVVREDLNGAKEHVATAYFTYVRVDKDGKPIKIPEYTPVT
EEEEEECEEEECCCCHHHHHHHHHHHHCHHHHHHHEEEEEEEEECCCCCCEECCCCCCCC
EREKRLYEEALTRRGLRK
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]