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The map label for this gene is 15898888

Identifier: 15898888

GI number: 15898888

Start: 1925822

End: 1926151

Strand: Direct

Name: 15898888

Synonym: SSO2104

Alternate gene names: NA

Gene position: 1925822-1926151 (Clockwise)

Preceding gene: 15898887

Following gene: 15898889

Centisome position: 64.36

GC content: 35.15

Gene sequence:

>330_bases
TTGTTTACTTCGCCAGGGGTACAAATCTCGATTTACCCAAGAATAAGGTCTTGGAGTAACAAGGTGAGGAATCCGATAGA
AACGTCTTATAAGAGTGTTAAATCGTTCCTCCCCTTTACGTGTTCAACAAAGTTCATTTTCCGCATGTTAATCTTCTTAC
TTGACGTGCTCGTTTACTCCTTGTACACTATCCTCAAGGATAACGTGAAAATGAGGACTTTCAAATCACTAATTTCAAAA
AATATTGAAAATATATCTGAGATAGAGATTTATTTAAGTAAATTGGAGGAAACGCTTACTAATACTACAGGTTTATTTTT
AAGGAGGTGA

Upstream 100 bases:

>100_bases
GGTGAATATGTTACGAATAGTAAGAGGCGTAGTAAGGGTGAGCAGGTTAAATTTAGGCTGATCGTGTATAGGGAGAAGAT
CAAGAGGAAAAAGAAGGAGG

Downstream 100 bases:

>100_bases
TTTTTGGGAGTACCGGTTAGGGCGGGGTAGCTCACAGATATATAAACCCTATGAAAGTCTGATCCCTATTTCGAATGCAG
ATATTCCTAAAATAAGTCCA

Product: Fourth ORF in transposon ISC1225

Products: NA

Alternate protein names: Partial Transposase In ISC; Third ORF In Transposon ISC; Transposase ISC; Partial Transposase ISC

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MFTSPGVQISIYPRIRSWSNKVRNPIETSYKSVKSFLPFTCSTKFIFRMLIFLLDVLVYSLYTILKDNVKMRTFKSLISK
NIENISEIEIYLSKLEETLTNTTGLFLRR

Sequences:

>Translated_109_residues
MFTSPGVQISIYPRIRSWSNKVRNPIETSYKSVKSFLPFTCSTKFIFRMLIFLLDVLVYSLYTILKDNVKMRTFKSLISK
NIENISEIEIYLSKLEETLTNTTGLFLRR
>Mature_109_residues
MFTSPGVQISIYPRIRSWSNKVRNPIETSYKSVKSFLPFTCSTKFIFRMLIFLLDVLVYSLYTILKDNVKMRTFKSLISK
NIENISEIEIYLSKLEETLTNTTGLFLRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12828; Mature: 12828

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTSPGVQISIYPRIRSWSNKVRNPIETSYKSVKSFLPFTCSTKFIFRMLIFLLDVLVYS
CCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LYTILKDNVKMRTFKSLISKNIENISEIEIYLSKLEETLTNTTGLFLRR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFTSPGVQISIYPRIRSWSNKVRNPIETSYKSVKSFLPFTCSTKFIFRMLIFLLDVLVYS
CCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LYTILKDNVKMRTFKSLISKNIENISEIEIYLSKLEETLTNTTGLFLRR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA