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The map label for this gene is 15898880

Identifier: 15898880

GI number: 15898880

Start: 1914354

End: 1914725

Strand: Direct

Name: 15898880

Synonym: SSO2096

Alternate gene names: NA

Gene position: 1914354-1914725 (Clockwise)

Preceding gene: 15898879

Following gene: 15898882

Centisome position: 63.98

GC content: 29.03

Gene sequence:

>372_bases
TTGGAGAATAAGAGAATTTGTTTAGATACGGATGTACTTATAGATGCTTTTAGAAATGATATTAAGAAATTCATAGGTTA
TTACACTACCTGTATTAATCTTTATGAATTCTTGAGAGGATTAGCCTTTATTGGGAAAAATATAGATGAGTTCAAATCGT
GGATAGAACTTAACCTTAACGTAGTATGTATTGATAATAACTCCCTAAAAACTGCTTCAAGAATTTACGCAGAACTTAGA
AAGATGGGAGAAATAATTGAAGATCCAGATTTATTAATAGCTTCGATATGCATAGCTAATGACTTCTCTCTAATGACACA
TAATAAGAAACATTTTAAAAGATTAGAGAAATACGGCTTAAAACTAATTTAG

Upstream 100 bases:

>100_bases
TTTTCCAGAACATATTTAGAGAGGAAGAGGAGAGAATACCGAAATTAACTGAGGAAGAGGCTGAAATTCTTAAGGATTTG
ACTAAGGAGGATAGGAAGAA

Downstream 100 bases:

>100_bases
ACAAGCGTTTTTAAAACATATTAAACATATTTATTACAGAAACTAGAGAATATAGTGTAAATTTGCTTTACTGTTAAATT
CACTAAAAATTCACATTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MENKRICLDTDVLIDAFRNDIKKFIGYYTTCINLYEFLRGLAFIGKNIDEFKSWIELNLNVVCIDNNSLKTASRIYAELR
KMGEIIEDPDLLIASICIANDFSLMTHNKKHFKRLEKYGLKLI

Sequences:

>Translated_123_residues
MENKRICLDTDVLIDAFRNDIKKFIGYYTTCINLYEFLRGLAFIGKNIDEFKSWIELNLNVVCIDNNSLKTASRIYAELR
KMGEIIEDPDLLIASICIANDFSLMTHNKKHFKRLEKYGLKLI
>Mature_123_residues
MENKRICLDTDVLIDAFRNDIKKFIGYYTTCINLYEFLRGLAFIGKNIDEFKSWIELNLNVVCIDNNSLKTASRIYAELR
KMGEIIEDPDLLIASICIANDFSLMTHNKKHFKRLEKYGLKLI

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 14371; Mature: 14371

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKRICLDTDVLIDAFRNDIKKFIGYYTTCINLYEFLRGLAFIGKNIDEFKSWIELNLN
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCE
VVCIDNNSLKTASRIYAELRKMGEIIEDPDLLIASICIANDFSLMTHNKKHFKRLEKYGL
EEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCC
KLI
CCC
>Mature Secondary Structure
MENKRICLDTDVLIDAFRNDIKKFIGYYTTCINLYEFLRGLAFIGKNIDEFKSWIELNLN
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCE
VVCIDNNSLKTASRIYAELRKMGEIIEDPDLLIASICIANDFSLMTHNKKHFKRLEKYGL
EEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCC
KLI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]