| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is 15898853
Identifier: 15898853
GI number: 15898853
Start: 1882843
End: 1883277
Strand: Direct
Name: 15898853
Synonym: SSO2064
Alternate gene names: NA
Gene position: 1882843-1883277 (Clockwise)
Preceding gene: 15898852
Following gene: 15898855
Centisome position: 62.92
GC content: 37.24
Gene sequence:
>435_bases ATGTCTTGGGAAAAGAGTGGAAAAGAAGGAAGCCTATTGAGATGGTATGACGTAATGGAAGCTGAGAGATACGAGTATAC AGTAGGTCCAGCGGGTGAACAATTCTTTAACGGATTGAAACAAAATAAGATTATAGGAAGTAAGTGTAGTAAGTGTGGAA GAATATTCGTCCCCGCTAGATCCTATTGTGAACACTGTTTTGTCAAGATAGAGAATTACGTGGAAATAAATAAGGATGAA GCTTACGTGGATTCGTATACAATAATTTACAATGATGATGAAGGTAACAAATTAGCACAGCCAGTGTATATTGCCCTAAT TAGATTTCCTAATATTGAAGGAGGATTACTATGTTACGCTGAAGGAAATGTTAAAGTAGGAGCAAAAGCTAAGATTTTGA GCTTCCAGTGGCCTTTACGAGTCAAGGTTGACTAA
Upstream 100 bases:
>100_bases GAGTATGGAAATCATAGGGAAGAGAGTTAAGGCAGTATGGAGGCCAAAGGAGGAAAGGAAAGGAAGTATTGAAGATATTC AATGCTTTAAGGTGATCTAA
Downstream 100 bases:
>100_bases TTTTTTCGAAGATATTCTCACCCTTATATGTATATACTGAATTCACATCCAACTCAACGTTGCAAGAAACCATTCCATAT AACGTGCTACCAGATAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSWEKSGKEGSLLRWYDVMEAERYEYTVGPAGEQFFNGLKQNKIIGSKCSKCGRIFVPARSYCEHCFVKIENYVEINKDE AYVDSYTIIYNDDEGNKLAQPVYIALIRFPNIEGGLLCYAEGNVKVGAKAKILSFQWPLRVKVD
Sequences:
>Translated_144_residues MSWEKSGKEGSLLRWYDVMEAERYEYTVGPAGEQFFNGLKQNKIIGSKCSKCGRIFVPARSYCEHCFVKIENYVEINKDE AYVDSYTIIYNDDEGNKLAQPVYIALIRFPNIEGGLLCYAEGNVKVGAKAKILSFQWPLRVKVD >Mature_143_residues SWEKSGKEGSLLRWYDVMEAERYEYTVGPAGEQFFNGLKQNKIIGSKCSKCGRIFVPARSYCEHCFVKIENYVEINKDEA YVDSYTIIYNDDEGNKLAQPVYIALIRFPNIEGGLLCYAEGNVKVGAKAKILSFQWPLRVKVD
Specific function: Unknown
COG id: COG1545
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16467; Mature: 16336
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWEKSGKEGSLLRWYDVMEAERYEYTVGPAGEQFFNGLKQNKIIGSKCSKCGRIFVPAR CCCCCCCCCCCEEEEEEHHCCCCEEEEECCCCHHHHHHHHCCCCCCCHHCCCCEEEECHH SYCEHCFVKIENYVEINKDEAYVDSYTIIYNDDEGNKLAQPVYIALIRFPNIEGGLLCYA HHHHHHHEEEECEEEECCCCEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEE EGNVKVGAKAKILSFQWPLRVKVD CCCEEECCEEEEEEEECCEEEEEC >Mature Secondary Structure SWEKSGKEGSLLRWYDVMEAERYEYTVGPAGEQFFNGLKQNKIIGSKCSKCGRIFVPAR CCCCCCCCCCEEEEEEHHCCCCEEEEECCCCHHHHHHHHCCCCCCCHHCCCCEEEECHH SYCEHCFVKIENYVEINKDEAYVDSYTIIYNDDEGNKLAQPVYIALIRFPNIEGGLLCYA HHHHHHHEEEECEEEECCCCEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEE EGNVKVGAKAKILSFQWPLRVKVD CCCEEECCEEEEEEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA