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The map label for this gene is 15898785

Identifier: 15898785

GI number: 15898785

Start: 1801739

End: 1802593

Strand: Direct

Name: 15898785

Synonym: SSO1990

Alternate gene names: NA

Gene position: 1801739-1802593 (Clockwise)

Preceding gene: 15898784

Following gene: 15898786

Centisome position: 60.21

GC content: 32.87

Gene sequence:

>855_bases
ATGAAAATGAGTATAAGTACTCATTTACCAAGAATTTTAGACACATTAAATAGAAATAATATTAATCTATTCTCGGCACT
GAGTTTAACCAGCATAGTATACAATAACTTTGGAGAATTTCTCTCGAATAAACAGTCATATAGTGCTAATAACCCACTAT
TAAAGTATCAAATTATAATCCTAAAAGATAAAAATAAAACTAAGGATGTCGAAGAGAAGAAAAGCCTATTTAAGAGGGAA
ATAGCTGAACTTGTCTCAAGGAACTTTAAATTAGAGGGCGAAAAAGTAAAGAAATATTTTGATAATCTCAAAGAAATACT
AAAGTCGTTAAAATACACGATAGTAGACTTTGAAATAACTACTAGGACGAGGGCTTTAATAGGAGTTTCAACTTCTTTAG
GTAAGCTGATTTTTGACTCTGGGATTTCTTTCGATCCATACATGAACTTGCCTTACATACCTGCATCTGAAATTAAAGGT
ATTGTGAGAAGTTATATTGAGGATAAACTAGGCGAGCAAGATGCTGAGGAAATTTTCGGTAATGAGGAAATGGAAGGTAA
TGTAAACTTTACAGATGCCTATCCTACTAGGCCTGAGAATTTCTTGTTTGTACCAGACGTAATTACACCTCATTATAATA
AGAAGAAGTCTGAGGCTGATGCTGAGCCTAAGCCGGCTATTCATTTAACTATAGCTCCTAAAGTTTCGTTTAGATTTTTA
ATTTACTATAAGAGGGAAGATGTAGGAAAACCAATTTGTGATTCCTTACCTCTGGTGATTATGAAAGGTTTAGGTGCTAG
ATCTTCTGTTGGATATTCCTTATTTGAATTAAGTAAGATAGAGGTGATTAGATGA

Upstream 100 bases:

>100_bases
TATTATATAATTTCATATTTACTTTATTCCAGTTATCTTAAAGATCCAAATTCGAGCATAAAGGATACGTTATATCAGTT
TGCTAGATGTGTGATTTAAA

Downstream 100 bases:

>100_bases
GTACTGATGATAATTCTAGAGAAGAATTCTTAAACTACAAAATTATGGCATTACTTCATGATCCTCCAAATAAGGCGTGG
GTGATAACAAGTCGTGCACA

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Protein Cmr6 Family; Cmr6 Family CRISPR-Associated RAMP Protein

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKMSISTHLPRILDTLNRNNINLFSALSLTSIVYNNFGEFLSNKQSYSANNPLLKYQIIILKDKNKTKDVEEKKSLFKRE
IAELVSRNFKLEGEKVKKYFDNLKEILKSLKYTIVDFEITTRTRALIGVSTSLGKLIFDSGISFDPYMNLPYIPASEIKG
IVRSYIEDKLGEQDAEEIFGNEEMEGNVNFTDAYPTRPENFLFVPDVITPHYNKKKSEADAEPKPAIHLTIAPKVSFRFL
IYYKREDVGKPICDSLPLVIMKGLGARSSVGYSLFELSKIEVIR

Sequences:

>Translated_284_residues
MKMSISTHLPRILDTLNRNNINLFSALSLTSIVYNNFGEFLSNKQSYSANNPLLKYQIIILKDKNKTKDVEEKKSLFKRE
IAELVSRNFKLEGEKVKKYFDNLKEILKSLKYTIVDFEITTRTRALIGVSTSLGKLIFDSGISFDPYMNLPYIPASEIKG
IVRSYIEDKLGEQDAEEIFGNEEMEGNVNFTDAYPTRPENFLFVPDVITPHYNKKKSEADAEPKPAIHLTIAPKVSFRFL
IYYKREDVGKPICDSLPLVIMKGLGARSSVGYSLFELSKIEVIR
>Mature_284_residues
MKMSISTHLPRILDTLNRNNINLFSALSLTSIVYNNFGEFLSNKQSYSANNPLLKYQIIILKDKNKTKDVEEKKSLFKRE
IAELVSRNFKLEGEKVKKYFDNLKEILKSLKYTIVDFEITTRTRALIGVSTSLGKLIFDSGISFDPYMNLPYIPASEIKG
IVRSYIEDKLGEQDAEEIFGNEEMEGNVNFTDAYPTRPENFLFVPDVITPHYNKKKSEADAEPKPAIHLTIAPKVSFRFL
IYYKREDVGKPICDSLPLVIMKGLGARSSVGYSLFELSKIEVIR

Specific function: Unknown

COG id: COG1604

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32458; Mature: 32458

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMSISTHLPRILDTLNRNNINLFSALSLTSIVYNNFGEFLSNKQSYSANNPLLKYQIII
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEE
LKDKNKTKDVEEKKSLFKREIAELVSRNFKLEGEKVKKYFDNLKEILKSLKYTIVDFEIT
EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEEEC
TRTRALIGVSTSLGKLIFDSGISFDPYMNLPYIPASEIKGIVRSYIEDKLGEQDAEEIFG
CCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCC
NEEMEGNVNFTDAYPTRPENFLFVPDVITPHYNKKKSEADAEPKPAIHLTIAPKVSFRFL
CCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEE
IYYKREDVGKPICDSLPLVIMKGLGARSSVGYSLFELSKIEVIR
EEEECCCCCCCCHHCCHHHHHHCCCCCCCCCHHHHHHCCCEECC
>Mature Secondary Structure
MKMSISTHLPRILDTLNRNNINLFSALSLTSIVYNNFGEFLSNKQSYSANNPLLKYQIII
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEE
LKDKNKTKDVEEKKSLFKREIAELVSRNFKLEGEKVKKYFDNLKEILKSLKYTIVDFEIT
EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEEEC
TRTRALIGVSTSLGKLIFDSGISFDPYMNLPYIPASEIKGIVRSYIEDKLGEQDAEEIFG
CCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCC
NEEMEGNVNFTDAYPTRPENFLFVPDVITPHYNKKKSEADAEPKPAIHLTIAPKVSFRFL
CCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEE
IYYKREDVGKPICDSLPLVIMKGLGARSSVGYSLFELSKIEVIR
EEEECCCCCCCCHHCCHHHHHHCCCCCCCCCHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA