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The map label for this gene is 15898756

Identifier: 15898756

GI number: 15898756

Start: 1775885

End: 1776751

Strand: Direct

Name: 15898756

Synonym: SSO1960

Alternate gene names: NA

Gene position: 1775885-1776751 (Clockwise)

Preceding gene: 15898755

Following gene: 15898757

Centisome position: 59.35

GC content: 38.99

Gene sequence:

>867_bases
ATGTCTTTAACCATTAGAGGTCAAGTTATTTCGACAGAAAAAGAAGATGGATCGAGTTTTATGACAGCTGATGCTATAAT
TTTCAAATACCCAAAGGAGGCAATTACTTCGAAATCACTTATAATAGTACAACCCACAGAGAGAGCCATAGTTTTAATAC
AAGGACAAATTGTTGCAGATTTACCTCCCGGTAGTCATAATATTCAAACTCCAGGGAATCCGGTTTCAGCTTTTCTATCT
AAGTTTAGGTATAACACGTTACCATATGATACTGTAGTTTATTTCATCTCGACCACCAGACATGAGGTTAGAGTAGCGGG
TGTTAGCCAGACAGATGACCTAGTACCCTTAGAGTATGAGACCGCAATATACTTTAGAGTTCAAAACCCTGCAGCCTTAG
TCACAAATGTCCAGTTCGGTTCCCTATATTTCAAAGACGCAGATCTAGCTCATTATATTTCACCAATTGTAGATCAAGAA
GTTAGTTCAGTACTTAATCGTGTAAATCTAACTGATGTTTTCAAGAAGTTCTCTGAAATTTCTACTGCAGTTACGGCAGC
GTTAAAGCAATTCCTAGCAGAAATAGGTGTAGACCTAATATCTGTAAGAATAACTAGACTTCTGCCTCAAGATCCAGAGC
TGAGAAGAATAATACAATTAAGGGATATGGGAATACCATTAATGGATGCAGTTCGAATGGGTTTGGCTAGAATATTAGCT
GAACAGCAGAACGCAGCAGCAGTCAATATGGCAATCGGAGTGCCGTATTATCCAAACCTATCAACAATAGTTAATCTACC
AGATGGCCTAATAAGAGTAGGTATAGGTAGAAGGGGGCAACAACAGAGTGGTGGAGCACAACAGTAG

Upstream 100 bases:

>100_bases
AGAGCAGTATTTTATGATAGAATGAAATTATTTTATCCTCCAGAACTTAGAAAATAGTTACGAAAAAATTTAAATATCAA
CACTAGAATAATTCTAATAT

Downstream 100 bases:

>100_bases
AATTTTAGGTTATAATATTGCCACGTCAATTGGGTATTCTTTTATCCTAACTATAATTATGGCCATAGTATCGTTAATAG
TTAAGGCATTTTATCCTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Zinc Finger RanBP2-Type

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSLTIRGQVISTEKEDGSSFMTADAIIFKYPKEAITSKSLIIVQPTERAIVLIQGQIVADLPPGSHNIQTPGNPVSAFLS
KFRYNTLPYDTVVYFISTTRHEVRVAGVSQTDDLVPLEYETAIYFRVQNPAALVTNVQFGSLYFKDADLAHYISPIVDQE
VSSVLNRVNLTDVFKKFSEISTAVTAALKQFLAEIGVDLISVRITRLLPQDPELRRIIQLRDMGIPLMDAVRMGLARILA
EQQNAAAVNMAIGVPYYPNLSTIVNLPDGLIRVGIGRRGQQQSGGAQQ

Sequences:

>Translated_288_residues
MSLTIRGQVISTEKEDGSSFMTADAIIFKYPKEAITSKSLIIVQPTERAIVLIQGQIVADLPPGSHNIQTPGNPVSAFLS
KFRYNTLPYDTVVYFISTTRHEVRVAGVSQTDDLVPLEYETAIYFRVQNPAALVTNVQFGSLYFKDADLAHYISPIVDQE
VSSVLNRVNLTDVFKKFSEISTAVTAALKQFLAEIGVDLISVRITRLLPQDPELRRIIQLRDMGIPLMDAVRMGLARILA
EQQNAAAVNMAIGVPYYPNLSTIVNLPDGLIRVGIGRRGQQQSGGAQQ
>Mature_287_residues
SLTIRGQVISTEKEDGSSFMTADAIIFKYPKEAITSKSLIIVQPTERAIVLIQGQIVADLPPGSHNIQTPGNPVSAFLSK
FRYNTLPYDTVVYFISTTRHEVRVAGVSQTDDLVPLEYETAIYFRVQNPAALVTNVQFGSLYFKDADLAHYISPIVDQEV
SSVLNRVNLTDVFKKFSEISTAVTAALKQFLAEIGVDLISVRITRLLPQDPELRRIIQLRDMGIPLMDAVRMGLARILAE
QQNAAAVNMAIGVPYYPNLSTIVNLPDGLIRVGIGRRGQQQSGGAQQ

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31707; Mature: 31576

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTIRGQVISTEKEDGSSFMTADAIIFKYPKEAITSKSLIIVQPTERAIVLIQGQIVAD
CEEEEEEEEEECCCCCCCCEEEHHHEEEECCHHHHCCCCEEEECCCCCEEEEEECEEEEE
LPPGSHNIQTPGNPVSAFLSKFRYNTLPYDTVVYFISTTRHEVRVAGVSQTDDLVPLEYE
CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHEEEEEECCCCEEEEECCCCCCCCCCEEEE
TAIYFRVQNPAALVTNVQFGSLYFKDADLAHYISPIVDQEVSSVLNRVNLTDVFKKFSEI
EEEEEEECCCEEEEEEEEECEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
STAVTAALKQFLAEIGVDLISVRITRLLPQDPELRRIIQLRDMGIPLMDAVRMGLARILA
HHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EQQNAAAVNMAIGVPYYPNLSTIVNLPDGLIRVGIGRRGQQQSGGAQQ
HCCCCEEEEEEECCCCCCCHHHEEECCCCCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLTIRGQVISTEKEDGSSFMTADAIIFKYPKEAITSKSLIIVQPTERAIVLIQGQIVAD
EEEEEEEEEECCCCCCCCEEEHHHEEEECCHHHHCCCCEEEECCCCCEEEEEECEEEEE
LPPGSHNIQTPGNPVSAFLSKFRYNTLPYDTVVYFISTTRHEVRVAGVSQTDDLVPLEYE
CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHEEEEEECCCCEEEEECCCCCCCCCCEEEE
TAIYFRVQNPAALVTNVQFGSLYFKDADLAHYISPIVDQEVSSVLNRVNLTDVFKKFSEI
EEEEEEECCCEEEEEEEEECEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
STAVTAALKQFLAEIGVDLISVRITRLLPQDPELRRIIQLRDMGIPLMDAVRMGLARILA
HHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EQQNAAAVNMAIGVPYYPNLSTIVNLPDGLIRVGIGRRGQQQSGGAQQ
HCCCCEEEEEEECCCCCCCHHHEEECCCCCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA