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The map label for this gene is deaD [C]

Identifier: 15898673

GI number: 15898673

Start: 1692724

End: 1694721

Strand: Direct

Name: deaD [C]

Synonym: SSO1879

Alternate gene names: 15898673

Gene position: 1692724-1694721 (Clockwise)

Preceding gene: 15898672

Following gene: 15898675

Centisome position: 56.57

GC content: 36.64

Gene sequence:

>1998_bases
GTGACATTTGACGACTTAAATAAGTTAATCAGAGAGAAACTTAGCGTAGAAACGTACCCTTATCAAAAGTACATCAGCGA
AGAAATAGAGAAAAATCTGGACAGAAAGAGATTCATTATTATTTCAATGCCCACTGGTAGCGGGAAGACATTAATCGAAC
TATCCGTTGCCTATCATTTGACTAATAAGGTTAGCAACATAATTGTATTAGAACCCACTAGGCTTCTCTGCGACCAGATG
TACCATAGATTCTGGAGGGAGGTCTTTGATGATGATGTTGGTGTAGAGTATGAGGGAGATTGTGAGTCCTTTGAGAAAGG
CAAGAAAATAGTAGTGTCAACCCCATTTACAACAGCCAAATGTCTAGATAGAGCAGATGCAATAATAGTCGATGAAGTAC
ATCATGCCTTTGGAGACGCGAGATATGAGGAAGTATTAGTAAATTTAGAGCCTAAATTCTTAATAGGCTTTACTGCCTTA
CTACCTTCTTATAAAAAGTATCTTATAGATCCCCGATTAATTAAGTTATTAGGTCAACCTGAGTATTTAGCGTATGATTT
CAAGAGCCTCACTAAAATAGATCCATCTTTTAAGCTTCCTAAGGCAATAGCTGATATTTTCGATTCAGAGTTTAATAACT
TAGAGGATTCTGTCTACGAGGCCTTCTTCAAGGGACTAATAAAAGGAAATAAGGAAACGGTCAAGTTCTTAGAACTCACG
TTCTACACTTATGGCAAAGAGGCTTTCTGCGAAAGTTATAGAAGATTGATTGGGAAAGTAGAGGAGAGTCCTTACATTGA
TTCCATTTGCGATTCAAAGGATTTAAGCCACAAAGCTAGAGCATTAAAGAGCGTCTTAAACATTTATAGGGTTGATGAAT
TTAAACCAGTACTAATATTTACCTCCAGGAAGTCAACAGCATATGAATTCGAAAGGGCTATTTCTGATCTGGGGAAGGTG
AAAGTAATAACTGGAGACTCACCTAGATATGAGAGGCTGAAAGTTGTACAAAATCTCAGAAAAGGGGAAATTGACGTTCT
AATATCAACGATTGTGGGAGAGGAGGGTATTGATATACCCGAAGCTAAATTATTAATAATGACAGACGTTCCTCAAAGCC
CATTGAGGTTCTATCAACGATTGGGAAGGTTAATAAGAGGAAAGGAGAAAGAGGAAGGAGAATCAGCTATAAAATATTTG
GTTGTGACGTTGACCCCAAAGACTTCAGAATACGATAATCTAGATGAGGCGTTAAGGAATCTTTACTTAGAGGGAGTTGA
TGTGAGCTACCTTATTGAAAAGAGGGAAGATAAGGGGCCAGTTGCTAGAGTAATAGATATTATTAACAAAAGTGGAGGGA
GAGTCCTAATTAATCAGATAGATGATACGAAAAAGAGAACTCTCTCGTTACTCTCACTCCTCGAATCAAATGAAAGTAGG
TCTCACATAGACGAATACGTTGACAGAACACTGAGGGATGGTAAAGCGTTATATTATTACGATGAAGAGATGATGGGAAA
GATAATTAGCCAAGTCCTATTGGGGAGTTATTGTAACATAGGTTTTGGAGAGACTTACATGAGGTTATGTAATAGTGAAT
ATAAGAAAATTGGAGAGATTTTATGGAAGAAAAAAGGGAGTATAAAATTGGATAAGAAAAGTTCTCTTAGGCTTTTCATG
AAGTTATTTCTCTCCAGTAATTTGGATGAGGTAATTAACGAGTTAAGTAGAAGGAAAAGTGAGTACGAGAAGGAGTTGGA
GGGAAAAGATTATAGTGTTAAAGTCACTATGGGCAAAATTTGGAACGGCCTTATGGCTCAAATCCTCATCTCAGCTAGTG
TTGATTCAGTTACTGTGAATCCTAAAGTTCAAATAAATTACTATGACCTCAAAGATGAAAAGCTAGCTAAATTAAATTCT
CTTGTGATAGCCTATAATAGCTTGGTTAATTTTTATAAACTAACTTCTACTAGTAATGGTAAGGTAAACTCCAAATAG

Upstream 100 bases:

>100_bases
AGCTGAGTACTTACGCTCCATAATGAATTAACAGAATAAGGTTATAGAAGCGGAATGATAAATGGCTAACTTTATCACCT
CAATACATTAAATCTATATT

Downstream 100 bases:

>100_bases
TGTTATTAACGATCCAATTATTTGAGGTAGCGTAGGAGCTACACCCAATACTGCGAAACTAGTAATATAAGCCATCACTG
GCACTAATAAAGATCCAGTA

Product: ATP-dependent helicase, putative

Products: NA

Alternate protein names: Type III Restriction Res Subunit; DEAD/DEAH Box Helicase Domain-Containing Protein; DNA Repair Protein RAD; Type III Restriction Res Subunit Family

Number of amino acids: Translated: 665; Mature: 664

Protein sequence:

>665_residues
MTFDDLNKLIREKLSVETYPYQKYISEEIEKNLDRKRFIIISMPTGSGKTLIELSVAYHLTNKVSNIIVLEPTRLLCDQM
YHRFWREVFDDDVGVEYEGDCESFEKGKKIVVSTPFTTAKCLDRADAIIVDEVHHAFGDARYEEVLVNLEPKFLIGFTAL
LPSYKKYLIDPRLIKLLGQPEYLAYDFKSLTKIDPSFKLPKAIADIFDSEFNNLEDSVYEAFFKGLIKGNKETVKFLELT
FYTYGKEAFCESYRRLIGKVEESPYIDSICDSKDLSHKARALKSVLNIYRVDEFKPVLIFTSRKSTAYEFERAISDLGKV
KVITGDSPRYERLKVVQNLRKGEIDVLISTIVGEEGIDIPEAKLLIMTDVPQSPLRFYQRLGRLIRGKEKEEGESAIKYL
VVTLTPKTSEYDNLDEALRNLYLEGVDVSYLIEKREDKGPVARVIDIINKSGGRVLINQIDDTKKRTLSLLSLLESNESR
SHIDEYVDRTLRDGKALYYYDEEMMGKIISQVLLGSYCNIGFGETYMRLCNSEYKKIGEILWKKKGSIKLDKKSSLRLFM
KLFLSSNLDEVINELSRRKSEYEKELEGKDYSVKVTMGKIWNGLMAQILISASVDSVTVNPKVQINYYDLKDEKLAKLNS
LVIAYNSLVNFYKLTSTSNGKVNSK

Sequences:

>Translated_665_residues
MTFDDLNKLIREKLSVETYPYQKYISEEIEKNLDRKRFIIISMPTGSGKTLIELSVAYHLTNKVSNIIVLEPTRLLCDQM
YHRFWREVFDDDVGVEYEGDCESFEKGKKIVVSTPFTTAKCLDRADAIIVDEVHHAFGDARYEEVLVNLEPKFLIGFTAL
LPSYKKYLIDPRLIKLLGQPEYLAYDFKSLTKIDPSFKLPKAIADIFDSEFNNLEDSVYEAFFKGLIKGNKETVKFLELT
FYTYGKEAFCESYRRLIGKVEESPYIDSICDSKDLSHKARALKSVLNIYRVDEFKPVLIFTSRKSTAYEFERAISDLGKV
KVITGDSPRYERLKVVQNLRKGEIDVLISTIVGEEGIDIPEAKLLIMTDVPQSPLRFYQRLGRLIRGKEKEEGESAIKYL
VVTLTPKTSEYDNLDEALRNLYLEGVDVSYLIEKREDKGPVARVIDIINKSGGRVLINQIDDTKKRTLSLLSLLESNESR
SHIDEYVDRTLRDGKALYYYDEEMMGKIISQVLLGSYCNIGFGETYMRLCNSEYKKIGEILWKKKGSIKLDKKSSLRLFM
KLFLSSNLDEVINELSRRKSEYEKELEGKDYSVKVTMGKIWNGLMAQILISASVDSVTVNPKVQINYYDLKDEKLAKLNS
LVIAYNSLVNFYKLTSTSNGKVNSK
>Mature_664_residues
TFDDLNKLIREKLSVETYPYQKYISEEIEKNLDRKRFIIISMPTGSGKTLIELSVAYHLTNKVSNIIVLEPTRLLCDQMY
HRFWREVFDDDVGVEYEGDCESFEKGKKIVVSTPFTTAKCLDRADAIIVDEVHHAFGDARYEEVLVNLEPKFLIGFTALL
PSYKKYLIDPRLIKLLGQPEYLAYDFKSLTKIDPSFKLPKAIADIFDSEFNNLEDSVYEAFFKGLIKGNKETVKFLELTF
YTYGKEAFCESYRRLIGKVEESPYIDSICDSKDLSHKARALKSVLNIYRVDEFKPVLIFTSRKSTAYEFERAISDLGKVK
VITGDSPRYERLKVVQNLRKGEIDVLISTIVGEEGIDIPEAKLLIMTDVPQSPLRFYQRLGRLIRGKEKEEGESAIKYLV
VTLTPKTSEYDNLDEALRNLYLEGVDVSYLIEKREDKGPVARVIDIINKSGGRVLINQIDDTKKRTLSLLSLLESNESRS
HIDEYVDRTLRDGKALYYYDEEMMGKIISQVLLGSYCNIGFGETYMRLCNSEYKKIGEILWKKKGSIKLDKKSSLRLFMK
LFLSSNLDEVINELSRRKSEYEKELEGKDYSVKVTMGKIWNGLMAQILISASVDSVTVNPKVQINYYDLKDEKLAKLNSL
VIAYNSLVNFYKLTSTSNGKVNSK

Specific function: Has A Helix-Destabilizing Activity. Plays A Key Role In Optimal Cell Growth At Low Temperature And Is Required For Normal Cell Division. Suppressor Of A Mutant Defective In Rpsb Gene For Ribosomal Protein S2. [C]

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76437; Mature: 76306

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFDDLNKLIREKLSVETYPYQKYISEEIEKNLDRKRFIIISMPTGSGKTLIELSVAYHL
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEHHHHHH
TNKVSNIIVLEPTRLLCDQMYHRFWREVFDDDVGVEYEGDCESFEKGKKIVVSTPFTTAK
HHHHCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEEEECCCHHHH
CLDRADAIIVDEVHHAFGDARYEEVLVNLEPKFLIGFTALLPSYKKYLIDPRLIKLLGQP
HHHHCCEEHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
EYLAYDFKSLTKIDPSFKLPKAIADIFDSEFNNLEDSVYEAFFKGLIKGNKETVKFLELT
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHEEEE
FYTYGKEAFCESYRRLIGKVEESPYIDSICDSKDLSHKARALKSVLNIYRVDEFKPVLIF
HHHCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
TSRKSTAYEFERAISDLGKVKVITGDSPRYERLKVVQNLRKGEIDVLISTIVGEEGIDIP
ECCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
EAKLLIMTDVPQSPLRFYQRLGRLIRGKEKEEGESAIKYLVVTLTPKTSEYDNLDEALRN
CCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHEEEEEEEECCCCCCCCCHHHHHHH
LYLEGVDVSYLIEKREDKGPVARVIDIINKSGGRVLINQIDDTKKRTLSLLSLLESNESR
HHHCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCH
SHIDEYVDRTLRDGKALYYYDEEMMGKIISQVLLGSYCNIGFGETYMRLCNSEYKKIGEI
HHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LWKKKGSIKLDKKSSLRLFMKLFLSSNLDEVINELSRRKSEYEKELEGKDYSVKVTMGKI
HHCCCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHH
WNGLMAQILISASVDSVTVNPKVQINYYDLKDEKLAKLNSLVIAYNSLVNFYKLTSTSNG
HHHHHHHHHHHCCCCEEEECCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEECCCCC
KVNSK
CCCCC
>Mature Secondary Structure 
TFDDLNKLIREKLSVETYPYQKYISEEIEKNLDRKRFIIISMPTGSGKTLIELSVAYHL
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEHHHHHH
TNKVSNIIVLEPTRLLCDQMYHRFWREVFDDDVGVEYEGDCESFEKGKKIVVSTPFTTAK
HHHHCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEEEECCCHHHH
CLDRADAIIVDEVHHAFGDARYEEVLVNLEPKFLIGFTALLPSYKKYLIDPRLIKLLGQP
HHHHCCEEHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
EYLAYDFKSLTKIDPSFKLPKAIADIFDSEFNNLEDSVYEAFFKGLIKGNKETVKFLELT
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHEEEE
FYTYGKEAFCESYRRLIGKVEESPYIDSICDSKDLSHKARALKSVLNIYRVDEFKPVLIF
HHHCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
TSRKSTAYEFERAISDLGKVKVITGDSPRYERLKVVQNLRKGEIDVLISTIVGEEGIDIP
ECCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
EAKLLIMTDVPQSPLRFYQRLGRLIRGKEKEEGESAIKYLVVTLTPKTSEYDNLDEALRN
CCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHEEEEEEEECCCCCCCCCHHHHHHH
LYLEGVDVSYLIEKREDKGPVARVIDIINKSGGRVLINQIDDTKKRTLSLLSLLESNESR
HHHCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCH
SHIDEYVDRTLRDGKALYYYDEEMMGKIISQVLLGSYCNIGFGETYMRLCNSEYKKIGEI
HHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LWKKKGSIKLDKKSSLRLFMKLFLSSNLDEVINELSRRKSEYEKELEGKDYSVKVTMGKI
HHCCCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHH
WNGLMAQILISASVDSVTVNPKVQINYYDLKDEKLAKLNSLVIAYNSLVNFYKLTSTSNG
HHHHHHHHHHHCCCCEEEECCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEECCCCC
KVNSK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA