| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
Click here to switch to the map view.
The map label for this gene is yxiE [H]
Identifier: 15898657
GI number: 15898657
Start: 1681749
End: 1682180
Strand: Direct
Name: yxiE [H]
Synonym: SSO1865
Alternate gene names: 15898657
Gene position: 1681749-1682180 (Clockwise)
Preceding gene: 15898656
Following gene: 15898659
Centisome position: 56.2
GC content: 38.43
Gene sequence:
>432_bases ATGGTGTTTAAAAATATAGTAGTGGCTTACGACGGATCGCAAAACGCTAAAAGAGCGTTAGATGTTGCAATAGATCTGGC TAAACGATATGAGGCTAAACTTACTATAATAGAGGTAATAGATACTTCAGTACTTGCTGGAATGGGTTTAGGTCCAATTC CAGGTGAGGTAATAAATGAAATGTATAATAAGGCTAAGAGAGACGTTGAAGAGGCTAAGGAAAAAGCTGTAAATAGTGGA GTTAAAAACGTTGAAGCTGTAAACATTGAGGGAGACCCAGCAGCTGCAATAATGGACTACGCTGGAAAGACAGGAGCTGA TTTAATAGTCACTGGAAGTAGGGGATTATCAACTGTTAAGAGGATATTCCTAGGTAGTGTTTCATCTAGAATTGTCCATG AGGCCAAGATACCAGTATTAGTTGTTAAGTAA
Upstream 100 bases:
>100_bases TTTTAAATATGATTTTGATTCTTTCCTATCGTATGGCTCTTAACCACATGGATAAAGTTTTTTATATTTGTATGTCTATA TTATTTCGGTGACTTAAAAT
Downstream 100 bases:
>100_bases CTTTTTCTTCCTCTAATTTTATGCCCATTCTCTCAGCCCACCTCTTAACTATATCATACCCAAATTTTCTTATGAACTCT TTTCTACCCTCGTCAGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: USP YxiE [H]
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MVFKNIVVAYDGSQNAKRALDVAIDLAKRYEAKLTIIEVIDTSVLAGMGLGPIPGEVINEMYNKAKRDVEEAKEKAVNSG VKNVEAVNIEGDPAAAIMDYAGKTGADLIVTGSRGLSTVKRIFLGSVSSRIVHEAKIPVLVVK
Sequences:
>Translated_143_residues MVFKNIVVAYDGSQNAKRALDVAIDLAKRYEAKLTIIEVIDTSVLAGMGLGPIPGEVINEMYNKAKRDVEEAKEKAVNSG VKNVEAVNIEGDPAAAIMDYAGKTGADLIVTGSRGLSTVKRIFLGSVSSRIVHEAKIPVLVVK >Mature_143_residues MVFKNIVVAYDGSQNAKRALDVAIDLAKRYEAKLTIIEVIDTSVLAGMGLGPIPGEVINEMYNKAKRDVEEAKEKAVNSG VKNVEAVNIEGDPAAAIMDYAGKTGADLIVTGSRGLSTVKRIFLGSVSSRIVHEAKIPVLVVK
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 15226; Mature: 15226
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFKNIVVAYDGSQNAKRALDVAIDLAKRYEAKLTIIEVIDTSVLAGMGLGPIPGEVINE CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH MYNKAKRDVEEAKEKAVNSGVKNVEAVNIEGDPAAAIMDYAGKTGADLIVTGSRGLSTVK HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCCCEEEEECCCCHHHHH RIFLGSVSSRIVHEAKIPVLVVK HHHHHHHHHHHHHHCCCCEEEEC >Mature Secondary Structure MVFKNIVVAYDGSQNAKRALDVAIDLAKRYEAKLTIIEVIDTSVLAGMGLGPIPGEVINE CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH MYNKAKRDVEEAKEKAVNSGVKNVEAVNIEGDPAAAIMDYAGKTGADLIVTGSRGLSTVK HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCCCEEEEECCCCHHHHH RIFLGSVSSRIVHEAKIPVLVVK HHHHHHHHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7704263; 9384377 [H]