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The map label for this gene is 15898654

Identifier: 15898654

GI number: 15898654

Start: 1678371

End: 1679213

Strand: Direct

Name: 15898654

Synonym: SSO1861

Alternate gene names: NA

Gene position: 1678371-1679213 (Clockwise)

Preceding gene: 15898647

Following gene: 15898655

Centisome position: 56.09

GC content: 39.5

Gene sequence:

>843_bases
ATGAAAAGAGTAAAGACATATATACCTGGGCTTGATGAAATCCTTTACGGTGGAATTCCAGAAAGACACATAGTATTAGT
TTCGGGTGGACCGGGAACTGGTAAATCAATTCTAGGAAAACAATTCCTATATAACGGGCTAACAAAGGGTGAAGGAGGGG
TATTTATAGCCTTAGAGGAACATCCCGTCTCCGTACGTAGAAGCTTTGAGCACTTTAAATGGGATGTGAGAAAATATGAA
AGGGAAGGGAAATTCGCAATAATTGATACATTTACAGGTGGAATTGGTAATGTCGCACAAAGGGAGAAGTACGTTGTGAA
AAGCATAGATGATGTGAAGGAGTTATCAGAAAACATTAGAGCTGCAATAAAGGATATAAATGCTACTAGAATCGTTGTGG
ACTCAGTAAGTACACTTTACTTAACGAAACCAGCGATGGCTAGGAGTATTGTAATGCAATTGAAGAGAGTTATTTCCGGT
CTAGGATGTACTGCGATTTTCGTAAGTCAAGTTTCAGTTGGGGAAAGGGGATTTGGTGGGCCAGGCGTGGAACACGCAGT
TGATGGTATAATAAGGTTAGACCTTGATGAAGTTGAGGGCGTAATGTATAGGTCAATTATAATTTGGAAGATGAGGGATA
CTAAGATATCTATGGTTAGACACCCAATGGATATAACAGATAATGGAATTATAGTACAATGGGATAAGTATTTGAAGATA
AGCAATTGGTCAGTTTCAATTCAGCCCCTACCAGAAAATGAGATTAGCCAGATGAAGAAAGCTGTTGAAGAAGCCGAAAA
GGAAGTTGAGGTTAAGGTTGAGGGAAAAGAAGAGGAGGAGTAG

Upstream 100 bases:

>100_bases
AATAAATTATATAGAAGCTATAATGTAGGAATGTAACTTGTTATGAACAAAGAAGCAATCATCAAGCAGCTTTTATATGC
ATTACAAATTATAATATCTT

Downstream 100 bases:

>100_bases
AGTTAGTTATTTAATAAACAATATAACTTTTAACTTATGAATAAGATAAGCGTTTTTTCCCTAACAATCTCAAGGATTTT
GAGAAGTTTGTCAGCAGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKRVKTYIPGLDEILYGGIPERHIVLVSGGPGTGKSILGKQFLYNGLTKGEGGVFIALEEHPVSVRRSFEHFKWDVRKYE
REGKFAIIDTFTGGIGNVAQREKYVVKSIDDVKELSENIRAAIKDINATRIVVDSVSTLYLTKPAMARSIVMQLKRVISG
LGCTAIFVSQVSVGERGFGGPGVEHAVDGIIRLDLDEVEGVMYRSIIIWKMRDTKISMVRHPMDITDNGIIVQWDKYLKI
SNWSVSIQPLPENEISQMKKAVEEAEKEVEVKVEGKEEEE

Sequences:

>Translated_280_residues
MKRVKTYIPGLDEILYGGIPERHIVLVSGGPGTGKSILGKQFLYNGLTKGEGGVFIALEEHPVSVRRSFEHFKWDVRKYE
REGKFAIIDTFTGGIGNVAQREKYVVKSIDDVKELSENIRAAIKDINATRIVVDSVSTLYLTKPAMARSIVMQLKRVISG
LGCTAIFVSQVSVGERGFGGPGVEHAVDGIIRLDLDEVEGVMYRSIIIWKMRDTKISMVRHPMDITDNGIIVQWDKYLKI
SNWSVSIQPLPENEISQMKKAVEEAEKEVEVKVEGKEEEE
>Mature_280_residues
MKRVKTYIPGLDEILYGGIPERHIVLVSGGPGTGKSILGKQFLYNGLTKGEGGVFIALEEHPVSVRRSFEHFKWDVRKYE
REGKFAIIDTFTGGIGNVAQREKYVVKSIDDVKELSENIRAAIKDINATRIVVDSVSTLYLTKPAMARSIVMQLKRVISG
LGCTAIFVSQVSVGERGFGGPGVEHAVDGIIRLDLDEVEGVMYRSIIIWKMRDTKISMVRHPMDITDNGIIVQWDKYLKI
SNWSVSIQPLPENEISQMKKAVEEAEKEVEVKVEGKEEEE

Specific function: Unknown

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 kaiC domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1861_SULSO (Q97X93)

Other databases:

- EMBL:   AE006641
- PIR:   B90349
- RefSeq:   NP_343259.1
- ProteinModelPortal:   Q97X93
- SMR:   Q97X93
- GeneID:   1453376
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO1861
- NMPDR:   fig|273057.1.peg.1682
- HOGENOM:   HBG727042
- OMA:   GCTSIFV
- ProtClustDB:   PRK04328
- BioCyc:   SSOL273057:SSO1861-MONOMER
- HAMAP:   MF_01076
- InterPro:   IPR014774
- InterPro:   IPR004504
- InterPro:   IPR010624
- InterPro:   IPR022475
- PRINTS:   PR01874
- TIGRFAMs:   TIGR03877

Pfam domain/function: PF06745 KaiC

EC number: NA

Molecular weight: Translated: 31338; Mature: 31338

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS51146 KAIC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVKTYIPGLDEILYGGIPERHIVLVSGGPGTGKSILGKQFLYNGLTKGEGGVFIALEE
CCCCHHHCCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEC
HPVSVRRSFEHFKWDVRKYEREGKFAIIDTFTGGIGNVAQREKYVVKSIDDVKELSENIR
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AAIKDINATRIVVDSVSTLYLTKPAMARSIVMQLKRVISGLGCTAIFVSQVSVGERGFGG
HHHHCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
PGVEHAVDGIIRLDLDEVEGVMYRSIIIWKMRDTKISMVRHPMDITDNGIIVQWDKYLKI
CCHHHHHCCEEEEEHHHHHHHEEEEEEEEEECCCEEEEHHCCCCCCCCCEEEEEECEEEE
SNWSVSIQPLPENEISQMKKAVEEAEKEVEVKVEGKEEEE
ECCEEEEEECCCHHHHHHHHHHHHHHHCEEEEECCCCCCC
>Mature Secondary Structure
MKRVKTYIPGLDEILYGGIPERHIVLVSGGPGTGKSILGKQFLYNGLTKGEGGVFIALEE
CCCCHHHCCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEC
HPVSVRRSFEHFKWDVRKYEREGKFAIIDTFTGGIGNVAQREKYVVKSIDDVKELSENIR
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AAIKDINATRIVVDSVSTLYLTKPAMARSIVMQLKRVISGLGCTAIFVSQVSVGERGFGG
HHHHCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
PGVEHAVDGIIRLDLDEVEGVMYRSIIIWKMRDTKISMVRHPMDITDNGIIVQWDKYLKI
CCHHHHHCCEEEEEHHHHHHHEEEEEEEEEECCCEEEEHHCCCCCCCCCEEEEEECEEEE
SNWSVSIQPLPENEISQMKKAVEEAEKEVEVKVEGKEEEE
ECCEEEEEECCCHHHHHHHHHHHHHHHCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726