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The map label for this gene is 15898635

Identifier: 15898635

GI number: 15898635

Start: 1662175

End: 1662567

Strand: Direct

Name: 15898635

Synonym: SSO1834

Alternate gene names: NA

Gene position: 1662175-1662567 (Clockwise)

Preceding gene: 15898632

Following gene: 15898636

Centisome position: 55.55

GC content: 35.88

Gene sequence:

>393_bases
GTGGTAAGTAGATATTATGATTGGCTGAGGCAAGCAGAGAGAAACCTTAAGTCTGCAGAACTCAATTTCGAAAATGGAAT
TTATGAAGAAACTTGCTATGAAGCACAACAAGTTGCTGAAAAATCCGTTAAATCCTTGCTAAGTTATTTCCATAAGGAGA
TGAGAGGACACTCTATTACTTTTCTTTTACAATTCTCATCTATATCTATTCCCGACTGGATATTAAAATGTGCACAAGAG
CTTGATAAGAATTATATTCCTTCTCGATATCCTGATGTGTACGATCAAGGGGCTCCATTAGATTATTACAGCAAAGATGA
TGCTACGTCTTGTTTAGAATGTGCTAGGAAAATTTTAGCTTGGGTGAAAGAAATTGTTGGAACGTCTATGTGA

Upstream 100 bases:

>100_bases
ATATTCTAATATTATTTTTATCAACTAATACTAGATTATAAACTTAATGAAAACAGTAGAGTGCTAAACTTAATAAGCTC
TTAGGTTATATTATTACTCA

Downstream 100 bases:

>100_bases
AATATATTCTAAGTTTACTCCTAAGCTAGTTGTTATCTTTGGTTCTTATGCTAGAGGAGACTATACTGATCAGAGTGATA
TTGACGTTTTAATAGTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: HEPN Domain Protein; Hepn Domain Protein; Hepn Domain-Containing Protein; Hepn Domain; HEPN Domain; Amidophosphoribosyltransferase

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MVSRYYDWLRQAERNLKSAELNFENGIYEETCYEAQQVAEKSVKSLLSYFHKEMRGHSITFLLQFSSISIPDWILKCAQE
LDKNYIPSRYPDVYDQGAPLDYYSKDDATSCLECARKILAWVKEIVGTSM

Sequences:

>Translated_130_residues
MVSRYYDWLRQAERNLKSAELNFENGIYEETCYEAQQVAEKSVKSLLSYFHKEMRGHSITFLLQFSSISIPDWILKCAQE
LDKNYIPSRYPDVYDQGAPLDYYSKDDATSCLECARKILAWVKEIVGTSM
>Mature_130_residues
MVSRYYDWLRQAERNLKSAELNFENGIYEETCYEAQQVAEKSVKSLLSYFHKEMRGHSITFLLQFSSISIPDWILKCAQE
LDKNYIPSRYPDVYDQGAPLDYYSKDDATSCLECARKILAWVKEIVGTSM

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15185; Mature: 15185

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSRYYDWLRQAERNLKSAELNFENGIYEETCYEAQQVAEKSVKSLLSYFHKEMRGHSIT
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FLLQFSSISIPDWILKCAQELDKNYIPSRYPDVYDQGAPLDYYSKDDATSCLECARKILA
EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
WVKEIVGTSM
HHHHHHCCCC
>Mature Secondary Structure
MVSRYYDWLRQAERNLKSAELNFENGIYEETCYEAQQVAEKSVKSLLSYFHKEMRGHSIT
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FLLQFSSISIPDWILKCAQELDKNYIPSRYPDVYDQGAPLDYYSKDDATSCLECARKILA
EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
WVKEIVGTSM
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA