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The map label for this gene is 15898585

Identifier: 15898585

GI number: 15898585

Start: 1620614

End: 1621045

Strand: Direct

Name: 15898585

Synonym: SSO1786

Alternate gene names: NA

Gene position: 1620614-1621045 (Clockwise)

Preceding gene: 15898583

Following gene: 15898586

Centisome position: 54.16

GC content: 33.8

Gene sequence:

>432_bases
ATGGAGAGACAAGAATTGGCAGTTGTAGATGCTTCAGTTGTAATAAAATGGTTTGTTAATGAGAATTATAGTAAAGAAGC
GTTAATTCTTAAGGAGGCATATGTGAAAGGCTTAGAGGATTTACTAGCACCTTGTATTCTTCCCTTTGAAGTGCTAAACG
GGTTAAAGTATACTTATAGTCTGGGAGAAAAGGAACTGGAAGAGGTAGGGAAAATTTTATCCGATTTTCAGATAACGCTT
TACGGATTCGAAAATATATTGGACGAAATGGTTTCCTTATCTCTTAGATACGGTATAACAATATATGATGCAGCATATAT
AGCATTGGGTAAGGTTCTCAACGAGAAAGTTTATACTGCTGATGAAAGACTTATTAGAAAAGTCAAAGAATTACCTTTCG
TAATTCATATAAAGGACTATAAACAAAAGTAG

Upstream 100 bases:

>100_bases
GAAAAAGAAAAGATTATAAGAAGATTGCTGAGGCTTCAGTTAGATCTTATGAATTTTTCTTAAATTATGGCGGTAAGAGT
TCGGAAGAAATTATAAGGGA

Downstream 100 bases:

>100_bases
TTTTTAATGATTACTCTGACATAACCTCCTCCATAAACGGTACTCCAAGCTTGTAGTATTAGTAAGCATTTCCCTCAATT
CGCTCAAATAAAACTTATGG

Product: hypothetical protein

Products: NA

Alternate protein names: PilT Domain-Containing Protein

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MERQELAVVDASVVIKWFVNENYSKEALILKEAYVKGLEDLLAPCILPFEVLNGLKYTYSLGEKELEEVGKILSDFQITL
YGFENILDEMVSLSLRYGITIYDAAYIALGKVLNEKVYTADERLIRKVKELPFVIHIKDYKQK

Sequences:

>Translated_143_residues
MERQELAVVDASVVIKWFVNENYSKEALILKEAYVKGLEDLLAPCILPFEVLNGLKYTYSLGEKELEEVGKILSDFQITL
YGFENILDEMVSLSLRYGITIYDAAYIALGKVLNEKVYTADERLIRKVKELPFVIHIKDYKQK
>Mature_143_residues
MERQELAVVDASVVIKWFVNENYSKEALILKEAYVKGLEDLLAPCILPFEVLNGLKYTYSLGEKELEEVGKILSDFQITL
YGFENILDEMVSLSLRYGITIYDAAYIALGKVLNEKVYTADERLIRKVKELPFVIHIKDYKQK

Specific function: Unknown

COG id: COG4113

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16487; Mature: 16487

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERQELAVVDASVVIKWFVNENYSKEALILKEAYVKGLEDLLAPCILPFEVLNGLKYTYS
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LGEKELEEVGKILSDFQITLYGFENILDEMVSLSLRYGITIYDAAYIALGKVLNEKVYTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DERLIRKVKELPFVIHIKDYKQK
HHHHHHHHHHCCEEEEECCCCCC
>Mature Secondary Structure
MERQELAVVDASVVIKWFVNENYSKEALILKEAYVKGLEDLLAPCILPFEVLNGLKYTYS
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LGEKELEEVGKILSDFQITLYGFENILDEMVSLSLRYGITIYDAAYIALGKVLNEKVYTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DERLIRKVKELPFVIHIKDYKQK
HHHHHHHHHHCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA