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The map label for this gene is 15898481

Identifier: 15898481

GI number: 15898481

Start: 1519238

End: 1519717

Strand: Direct

Name: 15898481

Synonym: SSO1664

Alternate gene names: NA

Gene position: 1519238-1519717 (Clockwise)

Preceding gene: 15898478

Following gene: 15898482

Centisome position: 50.77

GC content: 31.67

Gene sequence:

>480_bases
ATGTCATGGGAAGAAGTATTTCGAAATTATCTTGATGATAAAGATATAAGGATTTTGAAACTTTTAAATCAGGACGCAAA
TATTTCTGACGCTAAGCTTGGAAAATTAGTGGGACTATCAAAGACCGCTGTGAGATTAAGAAGAGTAAAGCTGCAAAATT
CTGGTATTTTGAAAATAGTTGGCGTGGTAGTTTTACAAAACTTAGGTATTCCGTATGCAGACCTCTTGGTAAAGTTGAAG
AATGATATAGTACTAAGGGAGCAATTTATAAACAAACTAATTGCTAATGATCTAGTATATGAAGTGACTGAATACATGGG
AGATTGGGATTTACTTATAAGATTATTTCATAACAATATCGCTAAGTTGAAGGACGAATCATTAAAAATTATTAGCGATA
AGGCTGTTCAAGATTACAGAATTAGTTATGTAGTAAAAACTTATAAGGCATGGGGAAAATCGATTCTTTCTAGTATATAA

Upstream 100 bases:

>100_bases
TTTCTTATTACCATAATATGCTTATTGTCAGACAATGATAGATTAGTCGAAAGAAAATTATAAATAACAGTCATTTTTAT
ATGTTTTATTATGTTGAGAA

Downstream 100 bases:

>100_bases
ACCTTACTTGAAAACTCATAGTCTGATAGACTATATCTTCATAATTTTTTGGAATAGTAATAGTGTAGCAGTTGACAAAA
TAGTAGCGTTAATAATAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSWEEVFRNYLDDKDIRILKLLNQDANISDAKLGKLVGLSKTAVRLRRVKLQNSGILKIVGVVVLQNLGIPYADLLVKLK
NDIVLREQFINKLIANDLVYEVTEYMGDWDLLIRLFHNNIAKLKDESLKIISDKAVQDYRISYVVKTYKAWGKSILSSI

Sequences:

>Translated_159_residues
MSWEEVFRNYLDDKDIRILKLLNQDANISDAKLGKLVGLSKTAVRLRRVKLQNSGILKIVGVVVLQNLGIPYADLLVKLK
NDIVLREQFINKLIANDLVYEVTEYMGDWDLLIRLFHNNIAKLKDESLKIISDKAVQDYRISYVVKTYKAWGKSILSSI
>Mature_158_residues
SWEEVFRNYLDDKDIRILKLLNQDANISDAKLGKLVGLSKTAVRLRRVKLQNSGILKIVGVVVLQNLGIPYADLLVKLKN
DIVLREQFINKLIANDLVYEVTEYMGDWDLLIRLFHNNIAKLKDESLKIISDKAVQDYRISYVVKTYKAWGKSILSSI

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18294; Mature: 18163

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWEEVFRNYLDDKDIRILKLLNQDANISDAKLGKLVGLSKTAVRLRRVKLQNSGILKIV
CCHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHH
GVVVLQNLGIPYADLLVKLKNDIVLREQFINKLIANDLVYEVTEYMGDWDLLIRLFHNNI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AKLKDESLKIISDKAVQDYRISYVVKTYKAWGKSILSSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SWEEVFRNYLDDKDIRILKLLNQDANISDAKLGKLVGLSKTAVRLRRVKLQNSGILKIV
CHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHH
GVVVLQNLGIPYADLLVKLKNDIVLREQFINKLIANDLVYEVTEYMGDWDLLIRLFHNNI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AKLKDESLKIISDKAVQDYRISYVVKTYKAWGKSILSSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]